| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1179 |
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| Symbol | |
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| ID | 3933623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1142000 |
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| End bp | 1143295 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903527 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_509121 |
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| Protein GI | 89053670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.049393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAGG ACAAAGACCG GATCTTCACC AATATCTACG GCATGCACGA CCGGTCCCTG
GCCGGTGCCA AGCAGCGTGG CCATTGGGAT GGGACGAAGG ATCTGATCGG TCTGGGCCGC
GACAAGATCG TGGAGATCAT GAAGGCGTCC GGCCTGCGTG GGCGCGGCGG GGCGGGCTTC
CCGACCGGTC TGAAATGGTC GTTCATGCCC AAGGAATCGG ACGGCCGCCC GGCTTACCTG
GTGGTGAACG CGGACGAGAG CGAGCCCGGG ACCTGCAAGG ACCGGGAGAT CATGCGCAAT
GATCCCCACA CGCTGATCGA GGGCTGCCTG ATCGCCAGCT TCGCGATGAA CGCCAACGCC
TGCTACATCT ACATCCGTGG CGAATATATC CGCGAGCGGG AGGCGCTTCA GGCCGCGATT
GACGAGGCTT ATGAAGACGG GCTTCTGGGC AAGGACGCGG CGAAATCCGG CTGGGATTTT
GATCTTTATC TGGCCCACGG CGCCGGCGCG TATATTTGCG GCGAGGAAAC CGCGCTTCTG
GAATCGCTGG AAGGCCGCAA GGGCATGCCC CGCATGAAGC CGCCCTTCCC GGCGGGCGCG
GGCCTGTATG GCTGCCCCAC CACGGTCAAC AATGTCGAAT CCATCGCCGT CGTGCCCACG
ATCCTGCGGC GCGGCGCGGA GTGGTTCGCG GGCTTCGGTC GCCCCAACAA TGCGGGTACG
AAGCTGTTCG CGATCAGCGG TCATGTGAAC CAGCCCTGCG TCGTGGAAGA GGCGATGAGC
ATTTCCTTCG AGGAGCTGAT CGAGACCCAT TGCGGCGGCA TCCGTGGCGG GTGGGACAAC
CTCAAGGCGG TGATCCCCGG CGGGTCCTCC GTCCCATGCG TGCGCGGCGA AAACATGCGC
GACGCGATCA TGGATTTCGA CTATCTGCGC AACGATTTGC AGTCGGGCCT TGGCACGGCG
GCGGTCATCG TGATGGATAA TTCCACCGAC ATGATCAAGG CAATCTGGCG GCTCGCGGCC
TTCTACAAGC ACGAATCCTG CGGCCAATGC ACGCCGTGTC GCGAAGGCAC CGGCTGGATG
ATGCGGGTGA TGGAACGGCT GGTGAAGGGT GAGGCGCAGG TTGAAGAGAT TGACATGCTG
TTTGACGTCA CCAAGCAGGT GGAAGGTCAC ACGATCTGCG CGCTCGGCGA CGCGGCGGCC
TGGCCGATCC AGGGCCTGAT CCGCAACTTC CGCGACGAGA TCGAAGACCG CATCCGTGTC
AAACGCGGTG GCACGGTGGA GATCGCGGCA GAATAG
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| Protein sequence | MLQDKDRIFT NIYGMHDRSL AGAKQRGHWD GTKDLIGLGR DKIVEIMKAS GLRGRGGAGF
PTGLKWSFMP KESDGRPAYL VVNADESEPG TCKDREIMRN DPHTLIEGCL IASFAMNANA
CYIYIRGEYI REREALQAAI DEAYEDGLLG KDAAKSGWDF DLYLAHGAGA YICGEETALL
ESLEGRKGMP RMKPPFPAGA GLYGCPTTVN NVESIAVVPT ILRRGAEWFA GFGRPNNAGT
KLFAISGHVN QPCVVEEAMS ISFEELIETH CGGIRGGWDN LKAVIPGGSS VPCVRGENMR
DAIMDFDYLR NDLQSGLGTA AVIVMDNSTD MIKAIWRLAA FYKHESCGQC TPCREGTGWM
MRVMERLVKG EAQVEEIDML FDVTKQVEGH TICALGDAAA WPIQGLIRNF RDEIEDRIRV
KRGGTVEIAA E
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