| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1107 |
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| Symbol | |
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| ID | 3933551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1067701 |
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| End bp | 1068738 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903455 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509049 |
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| Protein GI | 89053598 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.151967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC GCGCGCCCAT TACAGGGAAA GTCACCTCCA TCGACGTGGC GCAGCGGGCA
GGCGTCAGCC AATCGGCGGT CAGCCGGGTC TTCACGCCGG GGGCCAGCGT GTCCAAGAAG
ATGGAGGCGC GGGTGCGCGA AGCCGCTGAC GATCTGGGCT ACCGGCCCAA TGTGCTGGCG
CGGTCGCTGA TCACCGGACG CTCGCGGATT ATCGGGCTGG TCGTGGCGCA TCTGGACAAT
TCCTTCTACC CCGATGCGCT GGAAAAACTC AGCGCCGCGC TTCAGGCCAA GGGCTACCAT
ATCCTTGTGT TCATGGCTGG AAATTCGGGC GATGACGTCG ACAGCGTGAT CCACGATCTG
ATGGATTATC AGGTGGATGG GATCATCACG GCCTCCATCA ACCTCAGCGG TGAATTGACC
GACCGGTGCC GGGCTGCGGG CCTTCCGGTG CTGTTGTTCA ACCGGGGGAT CGAAGGCTCG
GGCCTCAGTT CGGTCACGTC GGCCAACCGG ATCGGCGGGG CTGCGGTGGC CAATACGCTT
CTGGACGCGG GCCATACAAA AATTGCCACG ATCTCGGGCT GGATGGGGGC GTCCACCGGG
CGGGATCGCC GCGATGGTTT CGTGGCGGCG CTGGAGGCGC GGGGCGCACA GGTCCATGCC
GAGGCCGATG GCTTGTATGA CCGCGACACA GCCGCCCGGG TCGCCCGCGA CATGATGCAG
GCCGCACATC CCCCCGACGC GATTTTCGTG GGCAACGACC ATATGGCCAT GGCCGTCATG
GACACGCTGC GCTTTGATCT GGGCCTGAGC GTGCCCGATG ACGTGTCCAT CATCGGCTAT
GACGATGTGC CGATGGCGGC CTGGCCGTCC TACAACCTGA CGACGCTGCG CCAGCCGGTG
AACCGGATGG TGGAGGCGAC AGTCGACACC ATGCTTGATG AAATCGAAAC CGGGCGCGCG
CCTGGCACGC GGGTCGAGAT TGAGGGGGAG CTGATCCTCC GCACCTCTGC CCGCCTTCCC
AAAGGACCAA CCATATGA
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| Protein sequence | MIDRAPITGK VTSIDVAQRA GVSQSAVSRV FTPGASVSKK MEARVREAAD DLGYRPNVLA
RSLITGRSRI IGLVVAHLDN SFYPDALEKL SAALQAKGYH ILVFMAGNSG DDVDSVIHDL
MDYQVDGIIT ASINLSGELT DRCRAAGLPV LLFNRGIEGS GLSSVTSANR IGGAAVANTL
LDAGHTKIAT ISGWMGASTG RDRRDGFVAA LEARGAQVHA EADGLYDRDT AARVARDMMQ
AAHPPDAIFV GNDHMAMAVM DTLRFDLGLS VPDDVSIIGY DDVPMAAWPS YNLTTLRQPV
NRMVEATVDT MLDEIETGRA PGTRVEIEGE LILRTSARLP KGPTI
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