| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1071 |
|---|
| Symbol | |
|---|
| ID | 3933515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1032611 |
|---|
| End bp | 1033621 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637903419 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_509013 |
|---|
| Protein GI | 89053562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.591857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG CTACGCCGGT CCTCGTGAAT ATTCAATCGG GTTTGGCCAC CCGCCGCCCC
CCCCCGGAAC GAAAACTCTG CTGGGGCGCA CAGCGAACCG GTGGCGCCCC GGCCTCCCGC
CAAACGTTCA AATTCGCAGC CCGGCCCCGC GATGTGTCGT GCAGGTCAAA TGCGTTTATG
CCGCCGCAAT CACCCTACCC GTCTGCTCCG GCACCCGGCC CACCGCCACA TCCCCCTACC
AACCGCACCG CTCCCCGGGC CATACTCCCC GCCATGACCC GTTTGCTCCT CGTGCTCCTG
ATCCTGACCG CCCCCGCCCC CGCGCAGGCC GACATCGCCG ATGCGCCCCA GCTCCCGCCC
GCCTTTGTCG AGGCGCAGCT CTCCGCAATC GTGCGGTTGC GCCGGGTCGG GGCCACGCGC
GGTGGGTGCA CTGCTGTCCT CATCGCGCCC CGGGCCGTTC TGACTGCGGG TCACTGCGCC
GCCGCTCCGG CCACACGTCA GCAGGTTGTG ATTGTTCCGG GCCCCACTCC GCGCCAATTC
GCGGTGATTG AGCGTCTGCG CCACCCGGAA CCGGCGCGCA GTCCTGCCCT CACGATTGCC
GACTTCCGCA CCGACCTGGC CATTTTGCGA TTGGCCGAGG CGGTTCCCGC GGACCTCGCC
ACACCCATGC CGCTGGCCGC AGCCGACCCC GCCCTGCCCC ATGGCACCTA TGGCTTCGTC
AATGCGCAAC CCTCCGACGT CGTCCGTGGT CATGCGCCCT GTGCCATTCA GATCCGTGAC
GACACCCCCC TCGTCAGCGA TTGCCACGTC GTGAACGGTC AATCCGGCGG CGCATTGCTG
CGGCTCACGG AAGACGGCCC GCGACTGGTT GGCATTCTCG TGGCGCAGAT CAGCGGCAGC
GGTCCGGTGC GCAGCGCCGC CGCCCCGCTG GAACCCGATC ACTGGCCCGC CCTGGCGGAG
GTTCTGGCCC TGCCCGCACC CCTCACGACT GAGCGCGATC GCACAGATTA A
|
|---|
| Protein sequence | MENATPVLVN IQSGLATRRP PPERKLCWGA QRTGGAPASR QTFKFAARPR DVSCRSNAFM
PPQSPYPSAP APGPPPHPPT NRTAPRAILP AMTRLLLVLL ILTAPAPAQA DIADAPQLPP
AFVEAQLSAI VRLRRVGATR GGCTAVLIAP RAVLTAGHCA AAPATRQQVV IVPGPTPRQF
AVIERLRHPE PARSPALTIA DFRTDLAILR LAEAVPADLA TPMPLAAADP ALPHGTYGFV
NAQPSDVVRG HAPCAIQIRD DTPLVSDCHV VNGQSGGALL RLTEDGPRLV GILVAQISGS
GPVRSAAAPL EPDHWPALAE VLALPAPLTT ERDRTD
|
|---|
| |