Gene Jann_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0950 
Symbol 
ID3933394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp907639 
End bp908331 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID637903298 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_508892 
Protein GI89053441 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.977141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.257278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTAC AGGCAGATTT CCGGCGGCGC GGCTATGCGA TGTTGCCCGA TCCGGTCGGG 
ACGGGGGAGC TGGAGGCCCT GCGCACCGCC GCCGATGCCC TGATGGCGGA ACCGACCGCC
GCGGACGGCG GCAACCATGA CATCAACCGC GGCGCGGACC GGCAGTTCCT GCACAAGCGG
CACGCCGATT TCCCGGAGGT CGAACGCTTC CTGTTTTCCG ACCGGATGCG GGCCGTCACG
TCCATCGCGC TGGACGATCC GCATCTTTTC AACGAGCAAT TCGTCGTCAA GGGCCCCCAT
ACCGGCGCGT CGTTCGCCTG GCATCAGGAT GGGGCCTACG TGCCCTTTGC CCACAAGCCT
TACCTGTCTG TCTGGATCGC GCTGGATGAT GCGACATTGG AGAACGGCTC CCTCAGCTGC
CTGCCCCGCG ACCTTGATCG GGAGGGTCAC ATCGACCCGC ACCATTGGAA TGACATCGGC
AAAGAGAAGG TCGGCTATGA CGGTCCTGAT CCGGGAGAGG CCCTGCCCTG CCCCGCCGGA
ACCATGGTGA TTTTCTCCTC CCTCACGCTG CACCGGTCCG GTGCAAACAC CACGAACAGG
CCGCGCCGCG CCTACCTCGC GCAATATTCA GATGGACCGA TCCTTGATCC ATCCACAGGA
AATCCGCGCA ATTTCGCCAC GCCCTTCACC TGA
 
Protein sequence
MDVQADFRRR GYAMLPDPVG TGELEALRTA ADALMAEPTA ADGGNHDINR GADRQFLHKR 
HADFPEVERF LFSDRMRAVT SIALDDPHLF NEQFVVKGPH TGASFAWHQD GAYVPFAHKP
YLSVWIALDD ATLENGSLSC LPRDLDREGH IDPHHWNDIG KEKVGYDGPD PGEALPCPAG
TMVIFSSLTL HRSGANTTNR PRRAYLAQYS DGPILDPSTG NPRNFATPFT