Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0950 |
Symbol | |
ID | 3933394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 907639 |
End bp | 908331 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903298 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_508892 |
Protein GI | 89053441 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.977141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.257278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTAC AGGCAGATTT CCGGCGGCGC GGCTATGCGA TGTTGCCCGA TCCGGTCGGG ACGGGGGAGC TGGAGGCCCT GCGCACCGCC GCCGATGCCC TGATGGCGGA ACCGACCGCC GCGGACGGCG GCAACCATGA CATCAACCGC GGCGCGGACC GGCAGTTCCT GCACAAGCGG CACGCCGATT TCCCGGAGGT CGAACGCTTC CTGTTTTCCG ACCGGATGCG GGCCGTCACG TCCATCGCGC TGGACGATCC GCATCTTTTC AACGAGCAAT TCGTCGTCAA GGGCCCCCAT ACCGGCGCGT CGTTCGCCTG GCATCAGGAT GGGGCCTACG TGCCCTTTGC CCACAAGCCT TACCTGTCTG TCTGGATCGC GCTGGATGAT GCGACATTGG AGAACGGCTC CCTCAGCTGC CTGCCCCGCG ACCTTGATCG GGAGGGTCAC ATCGACCCGC ACCATTGGAA TGACATCGGC AAAGAGAAGG TCGGCTATGA CGGTCCTGAT CCGGGAGAGG CCCTGCCCTG CCCCGCCGGA ACCATGGTGA TTTTCTCCTC CCTCACGCTG CACCGGTCCG GTGCAAACAC CACGAACAGG CCGCGCCGCG CCTACCTCGC GCAATATTCA GATGGACCGA TCCTTGATCC ATCCACAGGA AATCCGCGCA ATTTCGCCAC GCCCTTCACC TGA
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Protein sequence | MDVQADFRRR GYAMLPDPVG TGELEALRTA ADALMAEPTA ADGGNHDINR GADRQFLHKR HADFPEVERF LFSDRMRAVT SIALDDPHLF NEQFVVKGPH TGASFAWHQD GAYVPFAHKP YLSVWIALDD ATLENGSLSC LPRDLDREGH IDPHHWNDIG KEKVGYDGPD PGEALPCPAG TMVIFSSLTL HRSGANTTNR PRRAYLAQYS DGPILDPSTG NPRNFATPFT
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