| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0878 |
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| Symbol | |
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| ID | 3933322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 833844 |
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| End bp | 834545 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903226 |
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| Product | helix-turn-helix, type 11 |
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| Protein accession | YP_508820 |
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| Protein GI | 89053369 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0490604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC AGATCCGCCT TGCCGAGATT GTGGAGATCG TCCGGGATGG ACGTCTCCAC
CTTGCACGGG ACATCGCTGA CGCTTTGGAC GTGTCGCAGC GCACGATCTA TCGGGACATC
GACACGCTTG TCGCCAACGG TGTTCCGATA GATGGCGAAC GCGGGGTTGG CTATATCCTG
CGAGAGCCGG TGTTTCTGCC GCCCATGTCG CTGTCGCTGA CAGAGTTGGA AGCGCTCAGT
CTTGGCATGG CGATTGTGCA GGAGGCGGCG GACGAAGAAC TTCAGGCCGC GGCACTTTCG
GTGATGGAGA AGGTCGGCGA CCATGCCTCC AACCGTCGCC GCGCGCCAAA ATCCTGGGGG
TTCGGCGTCT ATGCCTTTGA ACGGGCACAG GAGGGGTTCA AACACATGCC GCTTCTGCGC
CGCGCGATCC GCGAAGGACT GAAGCTGCGC ATCGACTACC TGTCACTCGC CGGAGAGGCG
TCCAGCCGCG TGATCCGCCC CTTGCAAACC GACTATTGGG GCCGGGTGTG GACCTGCTCG
GCCTGGTGCG AAACGCGGCG GGCCTTTCGC GCATTCCGCA TCGACCGGAT GCAGGAATGC
GACGCGACCG GCCAAACATT CCAGCCCGAG GCTGGCAAAA CAATCGAGGA TTACTTGCGC
CATGTCGCAG AGCAAATGGA TCGAGACGGA TACCGTTCAT GA
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| Protein sequence | MQRQIRLAEI VEIVRDGRLH LARDIADALD VSQRTIYRDI DTLVANGVPI DGERGVGYIL
REPVFLPPMS LSLTELEALS LGMAIVQEAA DEELQAAALS VMEKVGDHAS NRRRAPKSWG
FGVYAFERAQ EGFKHMPLLR RAIREGLKLR IDYLSLAGEA SSRVIRPLQT DYWGRVWTCS
AWCETRRAFR AFRIDRMQEC DATGQTFQPE AGKTIEDYLR HVAEQMDRDG YRS
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