| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0860 |
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| Symbol | |
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| ID | 3933304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 816281 |
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| End bp | 817816 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903208 |
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| Product | ABC transporter related |
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| Protein accession | YP_508802 |
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| Protein GI | 89053351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0483579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGG CACCGGCGAT TGAACTCAAG GGCATCTCCA AGGCCTTTGG CCCTGTTCAG
GCCAACAAAG ACATTTCGAT CTCGGTCACA AAGGGCACGA TCCACGGGAT TGTGGGCGAA
AACGGCGCAG GCAAATCGAC ACTGATGTCG ATCCTCTACG GCTTCTACAA GGCCGATGCC
GGTGAGATCT GGATCAACGG CACGCAGACA AACATCCCCG ACAGCCAGGC CGCGATCCGC
GCGGGCATCG GGATGGTGCA CCAGCACTTC AAGCTGGTCG AAAACTTCTC CGTGGTCGAG
AATGTGGTCC TGGGCGCGGA GGACGGCGCG ATGTTGCAGC CGTCCATCCG CAAGGCCCGG
CGCATCCTGA CAGAACTGGC CAGCGAATAC GGGCTGGACG TGAACCCCGA TGCGATTGTG
GAAGAGCTGT CCGTTGGCCA CCAGCAACGC GTTGAGATCC TGAAACAACT CTACCGTCAG
GCCGAAATCC TGATCCTGGA TGAGCCCACA GGCGTGCTGA CCCCCGCCGA GGCCGATCAA
CTGTTCCGCA TCCTTGGGCG CCTGAAGGAA GAAGGCAAAA CGATCATCCT GATCACCCAC
AAACTGCGTG AGATCATGGA GGTCACGGAC ACCGTGTCCG TCATGCGGCG GGGCGAGATG
ACGGCCACCG TCAAGACGGC GGAGACGTCA CCTGCGGGCC TCGCGGAACT GATGGTGGGT
CGCAAGGTTC TGCTGGAGGT CGACAAGGAC GCCGCCACCC CCGGCGATGT GGTCCTGAAC
GTGAAAAATC TGCGCGTCGT AGATGGCGCG GGCGTGGAGC GCGTCAAAAG CATCTCCTTC
CAGATCCGCG CGGGCGAAAT CCTGGGAATC GCGGGCGTGG CGGGCAATGG CCAGTCCGAA
GTGCTGGAGG TTCTCGGCGG CATGATCGCG GCCACATCCG GGGAAATCAG GCTTCACGGC
CAACCCATCG ACATCACCGG GCGCGACAGC GATGGCCAGT CCCGGCGCGT GCGTGGCATC
GGCCATGTGC CCGAGGACCG TCAGGTCGAG GGCCTGATCA TGCCCTATGA GGCGTGGGAA
AACGTGGCCT TTGGCTATCA CCACGACCCG CGCTATCAAT CCGGGCCACT GATGAACAAC
GCCGCGATCA AGGCCGATTG CGCCGAGAAG ATGGAACGCT ATGACGTCCG CCCCCCCAAC
CCGCGCCTGC CCGCGCGCAA CTTCTCAGGC GGGAACCAGC AGAAGATCGT CGTGGCCCGC
GAAATGGACC GTCAGCCGGA CCTTTTGCTG GTGGGTCAGC CCACGCGCGG CGTGGATATC
GGCGCGATTG AGTTTATCCA CAAGCAGATC ATCGCCCTGC GGGACGCGGG CAAGGCGGTG
CTTTTGGTGT CGGTGGAACT CGATGAAATC CTCGGCCTGT CCGACCGGAT CGCCGTCATG
TTCGACGGCT CGATCAGTGG TGAACGGCTG CCCGAGGAGA CCAACGAAGG CGATCTGGGC
CTGCTGATGG CTGGCGTAAC GGAAGGGGCC GCATAA
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| Protein sequence | MTTAPAIELK GISKAFGPVQ ANKDISISVT KGTIHGIVGE NGAGKSTLMS ILYGFYKADA
GEIWINGTQT NIPDSQAAIR AGIGMVHQHF KLVENFSVVE NVVLGAEDGA MLQPSIRKAR
RILTELASEY GLDVNPDAIV EELSVGHQQR VEILKQLYRQ AEILILDEPT GVLTPAEADQ
LFRILGRLKE EGKTIILITH KLREIMEVTD TVSVMRRGEM TATVKTAETS PAGLAELMVG
RKVLLEVDKD AATPGDVVLN VKNLRVVDGA GVERVKSISF QIRAGEILGI AGVAGNGQSE
VLEVLGGMIA ATSGEIRLHG QPIDITGRDS DGQSRRVRGI GHVPEDRQVE GLIMPYEAWE
NVAFGYHHDP RYQSGPLMNN AAIKADCAEK MERYDVRPPN PRLPARNFSG GNQQKIVVAR
EMDRQPDLLL VGQPTRGVDI GAIEFIHKQI IALRDAGKAV LLVSVELDEI LGLSDRIAVM
FDGSISGERL PEETNEGDLG LLMAGVTEGA A
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