Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0829 |
Symbol | |
ID | 3933272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 783854 |
End bp | 784438 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637903176 |
Product | hypothetical protein |
Protein accession | YP_508771 |
Protein GI | 89053320 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.417665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA CCCAAGCCAT CCGCAGCAAC ATCGTCGAGT GCCTGAACTT CCAGGACAGG TCCCCGCGCT CGGCCTATTG GTGGTATGTG CTGTTCATCA CGCTCGGCTC CTTGGTGACG TTCCTGCTCG ACTTCCTGAT CTTCTGGCCG TCGATGGACG ATGTGCTGCC ATTCCTTGCG GAAAACTTTG GCTCCATCAG TGATTTCTAC ATCAACGTGA TGCCGATCAC GACGTTCTGG TATCTGCTCA ACTACCTGCC AATCCTGGCT GTGGGCGTGC GCCGGATGCA CGATTGTGAC CGCCCGGGAT GGTGGTACAT CGTCACCGTG ATTTTCGTCA CAGTGATGTC ATTTGTGGTT TTTCAGATAA CGGCCCCACA ATCGGCCGAG ATGATGACCG TCGCATTCAA CCCCAATGTC ACGATGGCGG AGTTGGATGC CATGTTGGTG CGTATGAATG AGTTGAACGC AACTTCCTCG ATTCTGTCCG GCATCCAGAT GCTGCCAAGC CTGCTGGTTA TCATCTGGAT GGCCAGCAAA GGCACCGACG GCCCAAACCG ATATGGGGAG GATCCCTTGG CATGA
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Protein sequence | MTFTQAIRSN IVECLNFQDR SPRSAYWWYV LFITLGSLVT FLLDFLIFWP SMDDVLPFLA ENFGSISDFY INVMPITTFW YLLNYLPILA VGVRRMHDCD RPGWWYIVTV IFVTVMSFVV FQITAPQSAE MMTVAFNPNV TMAELDAMLV RMNELNATSS ILSGIQMLPS LLVIIWMASK GTDGPNRYGE DPLA
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