Gene Jann_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0659 
Symbol 
ID3933102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp630190 
End bp630987 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID637903006 
ProductPaaX-like 
Protein accessionYP_508601 
Protein GI89053150 
COG category[K] Transcription 
COG ID[COG3327] Phenylacetic acid-responsive transcriptional repressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.702789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACG CATCTGACCC CATCCGCCCC CTTGTGGAGG CGCTGAACGC CGAGGCACCG 
CTGAAGCTTT GGTCGGTGCT GGTCACCTGT CTGGGGGATG TCAGCCGCGA CGGCGTGATC
GAAGTTTCGG GCGTGGCGCT GTCGTCCTTT GTGGAACGTA TGGGGCTGCA ACCGCAGGCG
ATGCGGGTCG CGTTGCATCG GCTGAAGCGG GACGGATGGG TGGAGAGCCG CCGCCTGGGC
CGGGTTGGAT TTCACCGCCT CTCGGACAGT GCGCTGACGC AGACCCGCGC CGTGGCTGGC
CGGATCTACG GACCCGGCGC CGGACCCGCC CCTTGGCATC TGGCCGGAAT GCCGCCCGAC
GCGCCCGATG GGCTGTCACT TCTGCCGGAC ACGCTGTCGG CGACCCCGAT CTCCCGCAGG
TTCGCGTTGA TCTGTGGGCC GCTTGAGGAT GTGCCGGAGG ATTGGCTGCT GACCGCGCCG
TCGGGGCGGG GTCTTCCGGT GTGGGTGCAA GATGTGGTGG TGGAGGCGGG GTGCGAGGCC
GAGTTCAAAG CGTTGGAGCG CACGCTGGCC CAGATCGACA AGGTGCCCGA CACGCGGTTG
GAGCGGTTCA CGTTGCGGGT GCTGGTCCTG CACGCATGGC GGCGCCTGAT CCTGAGGTCC
AGCCCGGCGG CGGAGGCCGC ATTGGGCGGG GCGCGCGCAG AGATATCCTG CCGCGCACGG
GTTCATCAGC TTTTGGATCA GCTGGGCTCG GTCGAGCCTG ACTGGGATTT GCCCGCAACC
GAAGACGCCG CATCGTGA
 
Protein sequence
MADASDPIRP LVEALNAEAP LKLWSVLVTC LGDVSRDGVI EVSGVALSSF VERMGLQPQA 
MRVALHRLKR DGWVESRRLG RVGFHRLSDS ALTQTRAVAG RIYGPGAGPA PWHLAGMPPD
APDGLSLLPD TLSATPISRR FALICGPLED VPEDWLLTAP SGRGLPVWVQ DVVVEAGCEA
EFKALERTLA QIDKVPDTRL ERFTLRVLVL HAWRRLILRS SPAAEAALGG ARAEISCRAR
VHQLLDQLGS VEPDWDLPAT EDAAS