Gene Jann_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0643 
Symbol 
ID3933085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp613943 
End bp614446 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID637902989 
Producthypothetical protein 
Protein accessionYP_508585 
Protein GI89053134 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.147607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TCTTTGTCAG CGCCTGTCTG ATGGGCGCGC CCGTGCGGTA TGACGGACGG 
GCCAAGACGA TCGATGATCA GCTATTGGCC ACGTGGCGGG CCGAGGGACG GCTTGTGACC
CTCTGCCCCG AAATGGCCGC AGGGCTGCCC ACGCCCCGCC CGCCCGCTGA AATCGCGCCC
GGCGCGACGG CGGAGGCCGT GTTGAGGGGG CGTGCCGGTA TCTACGACAA TAATGGCCTC
GACATGACCC ATGAGTTCAC GACCGGGGCC GATCTGGCGT TGGAACTGGC CCGCGAACAG
GACTGTCGCT TCGCCCTTCT GGCCGATGGC AGCCCATCGT GTGGGTCGAC ATTCATCTAC
TCTGGCAATT TCGACGGTCA GCGACATGAG GGCCAGGGCG TGGTGGCCGC CCGCCTGCGC
GCCGCGGGGG TGGCCGTGTT CGCACCGTCG CAATTGCGCG ATCTGGCCCG CGCGCTGGAA
GAGGCGGAAA ATACCCGGGC TTAG
 
Protein sequence
MEKIFVSACL MGAPVRYDGR AKTIDDQLLA TWRAEGRLVT LCPEMAAGLP TPRPPAEIAP 
GATAEAVLRG RAGIYDNNGL DMTHEFTTGA DLALELAREQ DCRFALLADG SPSCGSTFIY
SGNFDGQRHE GQGVVAARLR AAGVAVFAPS QLRDLARALE EAENTRA