Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0583 |
Symbol | rplC |
ID | 3933025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 571210 |
End bp | 572082 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902929 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_508525 |
Protein GI | 89053074 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCT CTGGTGTAAT CGCGAAGAAG GTCGGGATGA CCCGCCTCTT CATGGAAGAC GGAAAGCAGA TCCCTGTGAC CGTTCTTCAA TTGGATAAAC TGCAGGTTGT TGCCAAGAAA ACGTCCGATT CCGACGGCTA TTCCGCCGTT CAGTTGGGGG CTGGTACGGC AAAGGCCAAG CGGACGTCGG CGCCCATGCG TGGCGTGTTC GCAAAGGCCA GTGTGGAGCC CAAGCGCAAG CTGGTGGAAT TCCGCGTGGA TGCCGATAAC CTCATCGAGG TTGGCGAGGA AATCATCGCC GACCACTACT TTGAGGGTCA GTTCGTGGAC GTCACGGGCA CCTCGATCGG TAAGGGCTTC CAGGGTGCCA TGAAGCGGCA CAACTTTGGC GGTCTGCGCG CATCGCACGG TGTGTCGATC TCGCACCGCT CCCACGGCTC TACCGGTCAG TGTCAGGACC CTGGCCGCGT CTTCAAAGGT AAGAAGATGG CAGGTCACAT GGGTGCGGCC CGTGTTACCA CGCAGAACCT TCAGATTGTG CGCACGGATA CCGATCGCGG TCTGATCATG ATCAAGGGCG CGGTTCCCGG ATCGAAGGGC GGTTGGGTGA CGGTCAAGGA TGCGGTGAAG AAGCCGTTCC CCGAGAACGC CATTCTGCCC GCAGCCCTGG CCTCTGCCGC TGCTGAAGCC GCCAAGCAGG CGGAAGAAGC AGCCGCCGCC GCCGCAGCCG AGGCCGAAGC AGAAGCAGCC CGTCTGGCAG AAGAGCAGGC AGCCGCCGAG GCGGAATCCC TGGCCCAGGC CGAAGCTGAA ATCGCAGCAG AGGGCAGCGA CGCCGCCCCT GAAGGCGATG CAGACAAGAA GGACGGTGAA TAA
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Protein sequence | MLRSGVIAKK VGMTRLFMED GKQIPVTVLQ LDKLQVVAKK TSDSDGYSAV QLGAGTAKAK RTSAPMRGVF AKASVEPKRK LVEFRVDADN LIEVGEEIIA DHYFEGQFVD VTGTSIGKGF QGAMKRHNFG GLRASHGVSI SHRSHGSTGQ CQDPGRVFKG KKMAGHMGAA RVTTQNLQIV RTDTDRGLIM IKGAVPGSKG GWVTVKDAVK KPFPENAILP AALASAAAEA AKQAEEAAAA AAAEAEAEAA RLAEEQAAAE AESLAQAEAE IAAEGSDAAP EGDADKKDGE
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