Gene Jann_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0558 
Symbol 
ID3933000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp546506 
End bp546967 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID637902904 
Producthypothetical protein 
Protein accessionYP_508500 
Protein GI89053049 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCGA TCCTGATCCT GGGTGCTGCA GTCTGGCCGG ACGGCCCCTC CCCCACCCTC 
AGGCGGCGCA CCCTGCACGG GGCTGCCCTG TTTCATGGGG GGCGCGGGGA TGTGGTGATC
CCCTGTGGCG GACTTGGGCG TTTCCCTCCC ACGGAAGCTG AGGCCATGGC TGCACTGCTG
CGCGATGCCG GCGTGCCGGA GGATCGTATC AGGCTGGAGC GGACCTCAAC CAACACGGTG
GAGAACATTC GCCACGCCCT GCCATTGCTG GCTGGGGAGC GTTGCGTCCT GATCGTCTCG
GATGCCTACC ACCTGCCCCG GGCCCGCCTC ATCGCCCGGC GCGAGGGGCT GGAGGTTTCC
GTGAGCGCAC CGCCACTGAC CGGGGCGCGT GTCTGGCCGC AGGCGAAAGG CTGGCTGCGC
GAGATCCCCG GTCTGATCGC GGTCCTTTTG CGGATCAGGT AG
 
Protein sequence
MTAILILGAA VWPDGPSPTL RRRTLHGAAL FHGGRGDVVI PCGGLGRFPP TEAEAMAALL 
RDAGVPEDRI RLERTSTNTV ENIRHALPLL AGERCVLIVS DAYHLPRARL IARREGLEVS
VSAPPLTGAR VWPQAKGWLR EIPGLIAVLL RIR