| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0543 |
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| Symbol | |
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| ID | 3932984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 532303 |
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| End bp | 533181 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902888 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_508485 |
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| Protein GI | 89053034 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG AGAGCATCGG AATTGTCGGC GCGGGCCAGA TGGGAAATGG CATCGCCCAT
GTTTGCGCGC TCGCGGGGTA TGAGGTGATC CTGTCGGACG TTAGTCAGGA TGCGCTGGAC
AATGCGGTCG CCCTCATTGA CCGAAATCTC GACCGTCAGG TCAGCCGGGA AAAGATTTCG
CAAACCGTCA AATCCGAAGC CATGGCACGG ATCAGCACGA CCCTGACCTT GTCCGATATC
GGCCCCACGG ACCTGATCAT CGAAGCTGCG ACCGAACGTG AGACGGTAAA GCAGGCAATT
TTCGAGGATC TTTTGCCGCA TATCAAACCG AACACCATCC TGACTTCAAA CACCTCGTCG
ATCTCGATCA CACGGCTTGC CTCGCGCACC GACCGGCCTG AGAAATTCAT GGGGTTTCAC
TTCATGAATC CCGTCCCTGT CATGCAACTT GTGGAACTGA TCCGGGGGAT TGCCACCGAC
GAGCCAACCT TCAAGGCCTG CAAATCCGTC GTGGACCGGC TCGGCAAGAC CGCCGCCACG
GCCGAGGATT TCCCCGCATT CATCGTCAAC CGCATTCTGA TGCCGATGAT CAACGAGGCC
GTCTATACGC TCTATGAAGG CGTCGGGAAT GTGACCTCCA TCGACATGGC CATGAAGCTG
GGAACCAACC ACCCGATGGG CCCGCTGGAG CTTGCGGATT TCATCGGCCT CGACACCTGT
CTTGCGATCA TGAACGTGCT GCATGACGGC CTGGCCGATA CCAAGTACCG CCCCTGTCCG
CTGCTCACAA AATACGTGGA GGCCGGGTGG CTTGGCCGAA AATCCCAGCG CGGGTTCTAT
GATTATCGCG GTGAAGGTGA CCCCGTGCCA ACGCGCTAA
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| Protein sequence | MDIESIGIVG AGQMGNGIAH VCALAGYEVI LSDVSQDALD NAVALIDRNL DRQVSREKIS
QTVKSEAMAR ISTTLTLSDI GPTDLIIEAA TERETVKQAI FEDLLPHIKP NTILTSNTSS
ISITRLASRT DRPEKFMGFH FMNPVPVMQL VELIRGIATD EPTFKACKSV VDRLGKTAAT
AEDFPAFIVN RILMPMINEA VYTLYEGVGN VTSIDMAMKL GTNHPMGPLE LADFIGLDTC
LAIMNVLHDG LADTKYRPCP LLTKYVEAGW LGRKSQRGFY DYRGEGDPVP TR
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