Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0514 |
Symbol | |
ID | 3932955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 507462 |
End bp | 509630 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902859 |
Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
Protein accession | YP_508456 |
Protein GI | 89053005 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCGG ATGGCAGGCC AGCAGACGAG ACGGTCGCAG AGGATGCGAT TACCGTCGAC GATCTGCTAA GCCTCGTCCG CAACTACAAC CCCAAAGCCC GTGAAAGCCT GATCCGTGAC GCCTTCGCCT ATGGCGCGCG GATGCATGAC GGGCAGACCC GCCATTCCGG TGAGCCGTAT TTCACCCACC CCGTGGCCGT CGCCGCCATC CTGACAGAGC AGCAGCTGGA CGATGCCACC ATCGTCACGG CTCTTCTGCA CGACACGATT GAAGACACGC GGTCGACCTA CGGGGAAGTG GCCAAGCATT TCGGGCCCGA GATCGCAGAG CTGATCGACG GCGTCACGAA GCTGACAAAC CTGCAATTGA GCAACCGCGA GAGCAAGCAG GCGGAAAATT TCCGCAAGCT GTTCATGGCG ATGTCCAAGG ATCTGCGGGT CATCCTGGTG AAGCTGGCCG ACCGGCTGCA CAACATGCGC ACGATCCGCC ACATGCGCCC CGACAAGCAG AAGCAGAAGG CGCAGGAGAC GATGGATATC TATGCGCCGC TGGCCGGTCG TATGGGTATG CACTGGATGC GCGAAGAGTT GGAGGACCTG TCGTTTCGGG TCCTGAACCC GGAGGCGCGA TCATCGATCC TGCGCCGCTT CATCACGCTG CAAAAGGAAA CCGGCGACGC GATCCCGAAG ATCAGCGACG ACATTGAGAC GGTACTGAAC AAACGCGGCG TACACGCGGA CGTTTATGGC CGTGCGAAAA AGCCCTATTC GATCTGGCGC AAGATGCAGG AGAAGAAGCT GGCCTTCTCG CGCCTGTCGG ACATCTACGG CTTCCGCGTG ATCACCGAGA CCGAAGATGA CTGCTACCGG GTGCTTGGCG CTATTCACCA GCGGTGGAAA TCCGTGCCGG GGCGGTTCAA GGATTACATC AGCCAGCCGA AGTCGAACGG CTATCGCTCC ATCCACACCA CGGTCAGCGG GCGCGATGGC AAGCGGGTGG AGGTGCAGAT CCGCACCTAT CAGATGCATG AAGTAGCCGA GGCGGGCGTG GCCGCCCATT GGGCGTACCG TGACGGTGTG CGGACCCAGA ACCCTTTCGC GGTCGATCCC ACCAAGTGGC TGGAAAGCCT GACCGAGCGG TTCGAGAACG CCGAGGACAC CAACGAGTTC CTCGAACATG TGAAGCTGGA AATGTACTCG GACCAAGTGT TCTGCTTCAC GCCCAAAGGC GACGTGGTCA AGCTGCCGCG CGGGGCGACG CCAATTGATT TCGCTTATTC GATCCACACG CGGATCGGGC ATTCCTGCGT CGGTGCAAAG GTGGATGGGC TGCGCGTGCC CCTGTGGACG CGGCTGAAGA ACGGGCAATC GGTCGATATC ATCACTGCGG AGGGGCAGAC GCCGCAAGCG ACCTGGATCG ATATTGCCAC CACGGGCCGC GCCAAGGCGG CGATCCGGCG GTCTCTGCGC GAGGTGGACC GGGATCGCTA CATCAAGCTG GGGCGGGAAT TGGCCCGCGT CGCGTTTGAA CAGATCGGCA AGAAAGCCAC GGACAAGGCT TTGGCAACAG CGGCCAAAGC CCTAGTACTG AGTGACGGGG ATGAGGTGCT GGCGCGCATC GGTTCGGCTG AACTGAGCGC GCGGCAGGTG GTGGCGGAGC TGTATCCGGA GCTGGCCAAT CCCGACGATG CGTCGGCCAT TGAAGGCGCC CGCGCCGTCA TCGGCCTGCC GCCCGGCGCG CGCATCCTTC GCGCCCAATG CTGCCAGCCG GTGCCCGGAG AGCGGATCGT GGGCATTACG TACCACGGCA AGGGGCCGAT CCTGCATTCC ATCGACTGCC CCGCCTTGGC CGCGTTCGAC GACCAGCCGG ACCGCTGGAT TGACCTGCAC TGGACCGAAG GCCGCCACGC GTCGATCCAC AACGTCACGG CGAATGTGAC GCTGTCGAAT GAGAATGGCG TGCTGGGGCG CATTTGCACC CTGATCGGGG AGCAGAACGC GAATATCTCG GACCTGCACT TCATTGACCG CAAGCCGGAT TTCTTCCGTA TTCTCATTGA TATGGACGTC CGGGACGCCG AACATCTGCA CGCCGTGATG ATGGCCGTGG AGGCAGATTC GGATGTTGCC GCATTAGATC GCTTCCGTGA TCTGGACCGG AGGCCCTAA
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Protein sequence | MAADGRPADE TVAEDAITVD DLLSLVRNYN PKARESLIRD AFAYGARMHD GQTRHSGEPY FTHPVAVAAI LTEQQLDDAT IVTALLHDTI EDTRSTYGEV AKHFGPEIAE LIDGVTKLTN LQLSNRESKQ AENFRKLFMA MSKDLRVILV KLADRLHNMR TIRHMRPDKQ KQKAQETMDI YAPLAGRMGM HWMREELEDL SFRVLNPEAR SSILRRFITL QKETGDAIPK ISDDIETVLN KRGVHADVYG RAKKPYSIWR KMQEKKLAFS RLSDIYGFRV ITETEDDCYR VLGAIHQRWK SVPGRFKDYI SQPKSNGYRS IHTTVSGRDG KRVEVQIRTY QMHEVAEAGV AAHWAYRDGV RTQNPFAVDP TKWLESLTER FENAEDTNEF LEHVKLEMYS DQVFCFTPKG DVVKLPRGAT PIDFAYSIHT RIGHSCVGAK VDGLRVPLWT RLKNGQSVDI ITAEGQTPQA TWIDIATTGR AKAAIRRSLR EVDRDRYIKL GRELARVAFE QIGKKATDKA LATAAKALVL SDGDEVLARI GSAELSARQV VAELYPELAN PDDASAIEGA RAVIGLPPGA RILRAQCCQP VPGERIVGIT YHGKGPILHS IDCPALAAFD DQPDRWIDLH WTEGRHASIH NVTANVTLSN ENGVLGRICT LIGEQNANIS DLHFIDRKPD FFRILIDMDV RDAEHLHAVM MAVEADSDVA ALDRFRDLDR RP
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