| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0469 |
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| Symbol | |
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| ID | 3932910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 467482 |
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| End bp | 468387 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902814 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_508411 |
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| Protein GI | 89052960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.516302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCA TCTTCATGGG GACGCCCGAC TTTTCCGTCC CGGTTCTGGA CGCGCTGGTG
GCCGCAGAGC ATGAGGTCGT CGCGGTCTAT TCGCAACCTC CACGCCCCGC GGGACGCGGC
AAGAGGGACC GCCCCAGTCC TGTGCAGGCG CGGGCAGAGA CCTTGGGGCT AACCGTGCGG
AATCCGGTCA GCCTGAAAAG CACAGAAGAG CAGTCGGCTC TTGCAGACTT GAACGCGGAT
GTCGCGGTCG TCGTGGCCTA CGGCCTGATC CTGCCGCAAG CGGTGCTTGA TGCACCCGCG
CGTGGGTGTC TCAATATCCA CGCCTCCCTG CTCCCGCGCT GGCGTGGGGC CGCGCCCATT
CATCGGGCGA TCATGGCAGG CGATACCATG ACAGGCGTGT GTATCATGCA GATGGAAGCC
GGCCTTGATA CGGGTCCCGT CCTGCTGCGC CGCGAGACAT CCATTGGGGC GGAGGACACA
ACCGGCACGC TCCACGACAG GCTTTCGGCC ATAGGGGCAA AGGCAATCGT GGACGCGCTC
TCTCAACTGG ACGAGCTGAC CCCCAAACCG CAGCCGGACG ATGGCGTCAC CTATGCCACA
AAGATTGATA AATCCGAGGC AAAGGTGGAT TGGACCGCCC CGGCCCCCCA TATCAATCGT
CAGATCCTTG GCCTGTCGCC CTTCCCGGGT GCCTGGACCA TGGCGGGCGG CAAGCGCCTG
AAACTGTTGC AGAGCCGCGT TGCGAACGGC ACGGGCGCCC TTGGTGAGGT GTTGCACGGG
CTAACCGTGG CCTGCGGCGA CGGAGCGGTG GAGATCTCGC GCGTTCAGCC TGAGGGCAAA
GGCGCGATGG ATGCGAAAGA CTGGCTCTTG GGTGCGCGGA TCGCGCCGGG GACGGTTTTG
GAGTAA
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| Protein sequence | MRIIFMGTPD FSVPVLDALV AAEHEVVAVY SQPPRPAGRG KRDRPSPVQA RAETLGLTVR
NPVSLKSTEE QSALADLNAD VAVVVAYGLI LPQAVLDAPA RGCLNIHASL LPRWRGAAPI
HRAIMAGDTM TGVCIMQMEA GLDTGPVLLR RETSIGAEDT TGTLHDRLSA IGAKAIVDAL
SQLDELTPKP QPDDGVTYAT KIDKSEAKVD WTAPAPHINR QILGLSPFPG AWTMAGGKRL
KLLQSRVANG TGALGEVLHG LTVACGDGAV EISRVQPEGK GAMDAKDWLL GARIAPGTVL
E
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