Gene Jann_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0440 
Symbol 
ID3932881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp443809 
End bp445017 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID637902785 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_508382 
Protein GI89052931 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTA TTATCGTCAT CGGAGCGGGT CAGGCGGGCG CGTCTTGCGT TGCCAAACTG 
CGGGCCGAAG GATTTGAGGG CAAGATTACC CTTATAGGTG ATGAGCCGGT GCCACCCTAT
CAGCGCCCAC CTCTCTCCAA GGCTTATCTG CTTGGCGATA TGGCGCTGGA ACGGCTCTTT
CTGCGGCCCG AGGCCTGGTA TGCGGATAAT GAGGTCGAAC TGCGCTTGGG TGCGCCTGTG
GACGCGATTG ACGCCGCTGA AAAGACGATC AGTGTGGAGG GCGACGTGCT GCCCTACGAG
GCCCTCGTGC TGGCAACAGG ATCGACGCCC CGTCGCTTGC CTGCCAAGAT TGGCGGCGAT
CTGGGGGGCG TCCACGTGGT GCGCACGCTG GCGGATGTCG ACGCGATGGA GCCCGAGGTG
ACAGGCAATC GCCGCGCGCT GATCGTGGGT GGGGGGTATA TCGGTCTGGA GGCGGCCGCC
GTTGCCCGCA AACGCGGCAT GGAGGTCACG CTGATCGAGG CCGCACCGCG TATTCTGGGC
CGGGTCGCGG CGTCAGAGAC GGCGGATTAT TTCCGCGATG TGCACCGCGC CAATGGTGTG
AGAATTCTGG AAGGCGTCGG CCTTGAGTGT ATCAACGGTG TGGATGGTCG CGTGGTCGGC
GCGATGCTGA CCAATGGCGA GGAACATCCC TATGACGTGG TGATTGCAGG CATCGGGATC
GTGCCCAACG ACAGCCCCGC AGAGATGGCG GGCGTGACGC TGGACAACGG TATCGCCACG
GACCTACAGG GGCGCACCAG CGACCCAAGC ATTTGGGCCG CAGGTGATTG CGCGTCGTTG
CCGTTCCGGG GTGAGCGCAT CCGGTTGGAG TCTGTGCAGA ACGCGATTGA TCAGGCGGAG
GCTGTGGCGA AGAACATCCT CGGTGCGACG GAGGATTACG TGCCCAAACC CTGGTTCTGG
TCGGATCAAT ACGACGTCAA ATTACAGATT GCCGGATTGA ATACGGGCTA CGACAAGGTC
GTCGTTCGGG ACGGTGGGGC GGCGCGGTCC CACTGGTATT ACAACGGCGA CACATTGCTG
GCCGTAGACG CGATGAACGA TCCGCGTGGC TACATGATCG GCAAGCGGTT GATTGAGGCT
GGAAAGTCGC CGTCGGCAGA CATCGTGGCG GACCCGGACA GCGACCTTAA GCCGTTGCTC
AAGGCATGA
 
Protein sequence
MDSIIVIGAG QAGASCVAKL RAEGFEGKIT LIGDEPVPPY QRPPLSKAYL LGDMALERLF 
LRPEAWYADN EVELRLGAPV DAIDAAEKTI SVEGDVLPYE ALVLATGSTP RRLPAKIGGD
LGGVHVVRTL ADVDAMEPEV TGNRRALIVG GGYIGLEAAA VARKRGMEVT LIEAAPRILG
RVAASETADY FRDVHRANGV RILEGVGLEC INGVDGRVVG AMLTNGEEHP YDVVIAGIGI
VPNDSPAEMA GVTLDNGIAT DLQGRTSDPS IWAAGDCASL PFRGERIRLE SVQNAIDQAE
AVAKNILGAT EDYVPKPWFW SDQYDVKLQI AGLNTGYDKV VVRDGGAARS HWYYNGDTLL
AVDAMNDPRG YMIGKRLIEA GKSPSADIVA DPDSDLKPLL KA