| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0405 |
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| Symbol | |
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| ID | 3932846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 408228 |
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| End bp | 408977 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902750 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_508347 |
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| Protein GI | 89052896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0055984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATG TGGTAGATGG AAAAGTCGTG GCGATCACCG GGGCAAGCCG GGGTATCGGT
GCCGCCGCCG CGCGCGAATT TGCGGCGTTG GGCGCGAAGG TCGTGCTTTT GGCCCGGTCG
CGGGATGCGA TTGCGGAACT GGCAGGCGAG ATTGGCGAAA ACGCCCTGGC CGTGCCCTGT
GATGTGGTGC GGTATTGGGA GGTCGAGGCC GCCTTCGGGG CTGCCGTGGA TACCTTTGGC
GCGCTCGACG TGGTGATCAA CAATGCCGGT GTGATCGAGC CTGTGGCGCG GATCGAGGAT
GCCAACCCTG ATGGCTGGGG TCAGGCCATC GACATCAACC TCAAGGGCAC GTTCAACGGC
GTCCGTGCGG CGCTGCCGCA TATGGGCGGC GGTGGGACGA TCATCGGCAT CTCGTCGGGG
GCCGCGACCA ATGCGCTGGA AGGCTGGTCG CATTATTGCG CGTCCAAGGC CGCCGCGTTG
ATGCTGACCC GCTCGCTCCA CAAGGAAATG GGCGATCGGG GCATTCGCGC CCTGGGCCTG
TCGCCGGGCA CTGTGGCGAC CCAGATGCAG GTGGAGATCA AGGCCTCAGG CGTGAACCCG
GTGGCGGGGC TCGACTGGTC CGATCATATT CCGCCGGAAT GGCCCGCCAA GGCATTGGCC
TGGATGTGTA CCGAGGCGGC AGATCCCTAT CTCGGTGGCG ATATCTCGCT TCGGGATGAA
GGTATTCGCG CGGTGGTCGG TCTCGCATGA
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| Protein sequence | MAHVVDGKVV AITGASRGIG AAAAREFAAL GAKVVLLARS RDAIAELAGE IGENALAVPC
DVVRYWEVEA AFGAAVDTFG ALDVVINNAG VIEPVARIED ANPDGWGQAI DINLKGTFNG
VRAALPHMGG GGTIIGISSG AATNALEGWS HYCASKAAAL MLTRSLHKEM GDRGIRALGL
SPGTVATQMQ VEIKASGVNP VAGLDWSDHI PPEWPAKALA WMCTEAADPY LGGDISLRDE
GIRAVVGLA
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