Gene Jann_0393 details

Gene Information

• Locus tag: Jann_0393
• ID: 3932834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 396206
• End bp: 396841
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637902738
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_508335
• Protein GI: 89052884
• COG category: [R] General function prediction only
• COG ID: [COG2910] Putative NADH-flavin reductase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.682232
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAATTT CGGTGATCGG TGCAAGCCGC GGCATTGGCC GCAAAGTGGT GGAAGAGGCT 
CTGGAACGCG GCCATAGCGT GACTGGCATG GCGCGGTCCG CCACATCGCT TGGAATAGAC 
CATGCGGAGT TCACCGCAAT CGACGGGGAT GCCACCAACG CGACCGATGT GACGCAAGCC 
ATCGACGGCG CGGACGCGGT GATCCTGACC CTCGGCGTGC CGAAAGATGC GCGGGTCCTG 
AAGTCCACGA CGCTATTCTC GGATGCCACA AGAACCTTGA TCACCGCGAT GGAAGAGGCG 
GGGATAAAAC GCCTGCTCAC CGTCACAGGC TTTGGCGCGG GCGACAGCAA AGAGAAACTC 
TCCACGCCGG AGCGTCTGAC CCAAAAAGCG TTCCTGGGCC GCGCCTATGC CGACAAGGAC 
CTGCAAGAAA AGTTGATCCG CGACAGCGAT CTGGACTGGA CCATCGCCCG CCCCGGCATC 
CTGTCGGACA ACCGTAAAAG CAACGCCTAT AAGGTGCTGG TCGAGAAAGA GACCTGGCGC 
AACGGGTTGA TCAACCGCTC AGACGTGGCA GACTTTTTGG TCACCGCTGC AGAGGACGAG 
AGCCACATCC ACAAAACCCC TGCCCTTCAA CGCTGA 

 

Protein sequence

MKISVIGASR GIGRKVVEEA LERGHSVTGM ARSATSLGID HAEFTAIDGD ATNATDVTQA 
IDGADAVILT LGVPKDARVL KSTTLFSDAT RTLITAMEEA GIKRLLTVTG FGAGDSKEKL 
STPERLTQKA FLGRAYADKD LQEKLIRDSD LDWTIARPGI LSDNRKSNAY KVLVEKETWR 
NGLINRSDVA DFLVTAAEDE SHIHKTPALQ R