Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0363 |
Symbol | |
ID | 3932804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 366101 |
End bp | 366958 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637902708 |
Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase |
Protein accession | YP_508305 |
Protein GI | 89052854 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA CTGTATATGT GAACGGCCAG TATCTGCCCG AGCAGGACGC CACCATCTCG ATCTTTGACC GTGGGTTCCT GTTCGCAGAC GGCGTCTATG AGGTCACAAG CGTGTTGGAC GGCAAGCTGA TCGACTTCGA CGGCCACGCG CGTCGCCTGC AACGCTCCCT TGATGAGCTG GACATGGCCA ACCCCACCAC GGAAGACGAG CTGCTGGAGA TCCACCGGGA GCTTGTCCGC GCCAACGACA TCACCGAAGG CCTGATCTAT CTGCAAGTCA CGCGCGGCGC GGCGGATCGC GACTTCGTTT ATCCTGCGGA CGACACCCCC CCGACCATCG TGCTGTTCAC CCAGAACAAG CCCGGCCTTG CCGGTAACCC GATGGCACAG ACCGGCATGA AGGTGATCTC CATCGAAGAT CAGCGCTGGG GCCGTCGCGA TATCAAGACG GTGCAGCTGC TCTATCCCTC TATGGGCAAG ATGGCCGCGA AGGCCGCGGG CGCCCATGAT GCCTGGATGG TGGAGGACGG AATGGTGACG GAGGGCACGT CGAACAACGC CTATATCGTG AAAGGCAACA CGATCATCAC GCGCAATCTG GGCCATGAGA TCCTCAGCGG CATCACCCGC GCCGCCGTTC TGCGGATGGC GGAAGAGGCG CAGATGAAGG TGGAGGAACG CCCATTCACG ATGGACGAAG CCAAGGCCGC CGATGAGGCG TTCGTGACGT CGGCCACCAC CTTCGTCATG CCCGTGGTGG AGATCGACGG AGAGGCCGTG GGCACCGGCA CCCCCGGCCA CGTCACCGCA CGCCTGCGCG ACATCTACCT GGACGAGATG CGCAAAGCCG CTGTTTAG
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Protein sequence | MTRTVYVNGQ YLPEQDATIS IFDRGFLFAD GVYEVTSVLD GKLIDFDGHA RRLQRSLDEL DMANPTTEDE LLEIHRELVR ANDITEGLIY LQVTRGAADR DFVYPADDTP PTIVLFTQNK PGLAGNPMAQ TGMKVISIED QRWGRRDIKT VQLLYPSMGK MAAKAAGAHD AWMVEDGMVT EGTSNNAYIV KGNTIITRNL GHEILSGITR AAVLRMAEEA QMKVEERPFT MDEAKAADEA FVTSATTFVM PVVEIDGEAV GTGTPGHVTA RLRDIYLDEM RKAAV
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