Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0305 |
Symbol | |
ID | 3932743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 312257 |
End bp | 313201 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637902648 |
Product | hypothetical protein |
Protein accession | YP_508247 |
Protein GI | 89052796 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATTTC CAACCGTCCC AACCTACCTC ATGCGCGCGC TTCAGATCGC GGTCATGGCT GTGGTCGTCT GGCTGCTGTG GCGTGCCGTG GATTGGCGTG AGGCTTTGGC GCTCCTGCGC TCTGCGGACC CCCGGTGGCT GGTGCTGGCG GCGCTGGCCT TGACCATGCA AACGATCCTG TCGGCGTTGC GGTGGCGGCT AACGGCGGCA CGGCTCCGGA TTTTGATCCC GGTGCCTGAA GCGCTGCGGG AGTATTATCT TAGCCAGGTC GTGAACCAAT CCCTGCCGGG TGGCGTCGTG GGTGACGCCA GCCGAGCCGT GCGCGCCCGA GGGCAGGCAG GGCTGTTGGC CTCGGGCCAA GCGGTGGTGT TTGAGCGGAT CGCGGGCCAG ATGGGCCTTC TGGCGATCCT GGCCGTCGGC CTGATCCTGG CTTTGGTGCT GCCCACGGGA ATGGCCTGGC CCGTTTGGTT GATCGCGCCG GTCGCGGTCG GTGGTGCGAT CCTGATCGGC GTCGTTACTG CGTTATGGCT GCAATCCTCT GGCGACACGG CCCTGGGGCG AACCATCCGC AGCTTTCGCA GCGCGGTGAT GGGCGACGAC GTCTGGCGTC ATCAACTGGG CCTCAGCCTT GGCACGGCGC TTTGCAACAT CACCGCTTTC GGCTTTTGCG CAGCAGCGCT CGGCGTGACC CTGCCGCTTC TCGCCGCCTT ATCGCTCGTG CCGCTGATCC TTTTTGCCAT GGTCCTGCCG TTGTCGATCA GCGGCTGGGG TCTTCGCGAA GGGGCGGCGA CAGTGCTGTT CCCGCTGGTG GGCGCGTCTA TGGGCGAGGG CCTTGCCGTC AGCGTCGCCT TCGGCCTTGT CTTCCTCTCC ACCGTTGTTC CGGGCCTTAT CTTGACCTGG ATGCGACCAA ACGCACCTGT GTTTGGACGA CGGCGCGCTA AATGA
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Protein sequence | MTFPTVPTYL MRALQIAVMA VVVWLLWRAV DWREALALLR SADPRWLVLA ALALTMQTIL SALRWRLTAA RLRILIPVPE ALREYYLSQV VNQSLPGGVV GDASRAVRAR GQAGLLASGQ AVVFERIAGQ MGLLAILAVG LILALVLPTG MAWPVWLIAP VAVGGAILIG VVTALWLQSS GDTALGRTIR SFRSAVMGDD VWRHQLGLSL GTALCNITAF GFCAAALGVT LPLLAALSLV PLILFAMVLP LSISGWGLRE GAATVLFPLV GASMGEGLAV SVAFGLVFLS TVVPGLILTW MRPNAPVFGR RRAK
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