Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0286 |
Symbol | radC |
ID | 3932724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 291578 |
End bp | 292351 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902629 |
Product | DNA repair protein RadC |
Protein accession | YP_508228 |
Protein GI | 89052777 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.697565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATC AGCCTGCGTT TACCTTCGAT GAAGCCTCAC CAGAGTTTGT GGATGCCACG CTGGTCGCAC CGCGCAAGGC GGGTGGCCCT TCCAAGGGGG CAGAGGCGCA TCGCCACAAA CATCGTGATC GCTTGCGGCA ACGTTTTACG GACGGTGGCG CAGATGCCGT GCCGGATTAT GAGCTGCTGG AAATGGTCCT CTACGGGGCG ATTCTGCGGG GCGACACAAA ACCGCTCGCC AAACGCCTGA TTGATCGGTT CGGAGATCTG AACCGCGTTC TGGCCGCCCC CGTCGCCCGC CTGAAAGAGG TGGAGGGCGT CGGCGACAAG GTCGTCTTCC AACTGAAGCT GATCGAAGCC ACGGGTCACC GCATGGCCCG CGCCAAGGTG ATGCAGAAGC CGATCCTGTC ATCATGGGAC GCGCTGCTGG CGTATTGTCA GACGGCCATG GCCCACCGCG ATCTGGAGCA GTTCCGCGTT CTCTACCTCG ACCGCAAGAA CGTGCTTGTG GCCGACGAGG CGCAAGCCGA TGGGACGGTG GACCACGTCC CAGTCTACCC GCGGGAGGTC ATCAAACGCG CGCTGGAACT CAATGCGACC GCCCTTATTC TGGTCCACAA TCATCCCTCA GGCGATCCGA CGCCGTCGGA GGCGGACGTG CAGATGACCA TGGCGATCCG GGATGCGGCA GACGTCTTCA ACATCGCCAT CCATGACCAT CTGGTGATCG GCAAAGCGCG GGAGTTGAGT TTCCGCGCGG AAGGTTACCT TTAG
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Protein sequence | MSDQPAFTFD EASPEFVDAT LVAPRKAGGP SKGAEAHRHK HRDRLRQRFT DGGADAVPDY ELLEMVLYGA ILRGDTKPLA KRLIDRFGDL NRVLAAPVAR LKEVEGVGDK VVFQLKLIEA TGHRMARAKV MQKPILSSWD ALLAYCQTAM AHRDLEQFRV LYLDRKNVLV ADEAQADGTV DHVPVYPREV IKRALELNAT ALILVHNHPS GDPTPSEADV QMTMAIRDAA DVFNIAIHDH LVIGKARELS FRAEGYL
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