| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0284 |
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| Symbol | |
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| ID | 3932722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 289723 |
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| End bp | 290448 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902627 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_508226 |
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| Protein GI | 89052775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.668696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTTC CAACCCCGCT TGTCCCCGCC CGCCTTCTGC GTCGTTACAA ACGCTTCCTG
TCCGATGCCG TGCTGGAGGA CGGGACGGAG ATCACCGCCC ATTGTCCCAA CCCGGGCGCG
ATGCTGGGCC TGAAAGATGA CGGCGCGCGG ATCTGGCTGT TGCCCAATGA CGATCCGAAG
AAAAAGCTGA AATACGGTTG GCGGTTGGTG GAACTGCCAG ATGGCCATTT CGCGGGCATC
GATGCGGGCC TGCCGAACGC TTTGGTGAAG GAGGCGTTGG CCGAGGGGCA GATCGAGGCG
CTGCGCGGTT ATTCCAGTAT CCGGCCCGAA CAGAAATACG GCGACGAGAA CAGTCGCATT
GATTTCCTGT TGTCTGAGCC GGGACGGCCC GATGCCTTTG TTGAAGTCAA GAATTGCCAC
CTTCGGCGCG AGAGCGATTG GGCCGAATTC CCCGATTGCG TGACGGACCG TGGCGCGAAG
CATCTGCGTG AGCTGACAAA GATTGCCCGA AGCGGGGGGC GCGCGGTCAT GCTGTATGTC
GTGCAGCGTA CCGATTGCGC GCGCTTCCGC CTCGCGCCGG ATCTGGACCC GGCCTATGCC
CGCGCCTTCG ATGCGGCCCG TGATGCGGGC GTGGAAGTGC TTTGCCACGG CACCGATATT
ACGCCTGAGG GGATCACCCT TACGGGACCA TTGCCTGTCG ACCCATCGCC GCAGGCGCGG
GACTGA
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| Protein sequence | MRFPTPLVPA RLLRRYKRFL SDAVLEDGTE ITAHCPNPGA MLGLKDDGAR IWLLPNDDPK
KKLKYGWRLV ELPDGHFAGI DAGLPNALVK EALAEGQIEA LRGYSSIRPE QKYGDENSRI
DFLLSEPGRP DAFVEVKNCH LRRESDWAEF PDCVTDRGAK HLRELTKIAR SGGRAVMLYV
VQRTDCARFR LAPDLDPAYA RAFDAARDAG VEVLCHGTDI TPEGITLTGP LPVDPSPQAR
D
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