Gene Jann_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0252 
Symbol 
ID3932690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp252225 
End bp253100 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID637902595 
Productphosphoserine phosphatase 
Protein accessionYP_508194 
Protein GI89052743 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCG TCACCCTCAT GACCAACCAC GCCATGTATC TGGACGGCAG CCTTGTGACC 
AACCTGGTCA AAGCCATGAA CGCCGAGGCC CCCCGCTGGC TTGATCCCAA CCATTGCGCC
GAGTTCGACA CACCGAAGAT CCCGAAGAAT ATCCAGACGG TCTGGGAAAG CCTCAGCGCC
GAAGGGGTGG ATCTTGTCTG GCAAAAGGCG GGCGACCGGA AGAAGCGGAT GCTTCTGGCC
GATATGGACA GCACGATGAT CCAGCAGGAA TGTATTGATG AGCTCGCCGA TGAAGCGGGT
GTCGGCAAGC GCGTGGCCGA CATCACCGCG CGCGCCATGA ATGGGGAGTT GGAGTTTGAA
GACGCACTGC TGGAACGTGT CGGTCTTCTG AAGGGTCTGT CCGAGGCGAC CATTGCGACG
GTTCTGGAAA AGCGCATCAC GCTGATGCCC GGGGGGGATG TCCTGCTTGC CACGATGAAG
GCAAATGGCG CCCATTGCGC TCTGGTCTCC GGCGGCTTTA CCGCGTTTAC CAGCGCCATC
GCCGCGAAAC TCGGCTTTGA CGAACATCAC GCCAATACTC TGCTTGCGGA GAACGGAGCA
CTCACCGGCG ATGTCGCCCG TCCGATCCTG GGGCGCGACG CCAAGGTCGA CGCGCTGACC
CGCATCACCA AAACCCTCGG TATCAAGCCC AAAGACGTCC TCGCCGTGGG GGACGGGGCC
AACGATCTCG GCATGCTCCA CCTTGCCGGA ACCGGCGTCG CGCTACACGC GAAACCTGCG
GTTCAGGAAC AAGCAAAGCA CCGCGTGAAT CACGCCAACC TCACGGCGCT ACTGTTCATT
CAAGGGTATG CTAAGGCGGA TTTCGTCACG CCGTGA
 
Protein sequence
MFTVTLMTNH AMYLDGSLVT NLVKAMNAEA PRWLDPNHCA EFDTPKIPKN IQTVWESLSA 
EGVDLVWQKA GDRKKRMLLA DMDSTMIQQE CIDELADEAG VGKRVADITA RAMNGELEFE
DALLERVGLL KGLSEATIAT VLEKRITLMP GGDVLLATMK ANGAHCALVS GGFTAFTSAI
AAKLGFDEHH ANTLLAENGA LTGDVARPIL GRDAKVDALT RITKTLGIKP KDVLAVGDGA
NDLGMLHLAG TGVALHAKPA VQEQAKHRVN HANLTALLFI QGYAKADFVT P