| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0245 |
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| Symbol | |
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| ID | 3932683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 240739 |
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| End bp | 242535 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902588 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_508187 |
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| Protein GI | 89052736 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGAC GTCAGATAAT CGCATCGGCA CTTGTAGCCT GTGCCCTCGC AGGCGCAGGG
CAGGCGCAGG ATATTCAGCT TTCGGCCCCG GGGGTCGATG AAGATCTGAC AGATCGCCTG
CGGGCCTCAT CGCTGTTGCT GCAAGAGACG GAAGAGGTCC GCACTGCACA GGATCTCATC
GCAGCCGCAC GTGCAGACTA CGGACGCCTC GTCGCGGCCC TCTATGACGC GGGCCATTTC
TCCCCCGTTG TTCGCATTGA CGTTGATGGG CGCGAAGCGG CGCGGATACC GCCATTTGGT
GGCCCGCGAT CCGTGAACCA GATCACCATT CGCGTCGAAC CCGGCCCCGT ATTCCAGCTT
GGCACAGCAG AGATTGCGCC GCTGGCTCCT GACACCGAAT TACCGGGTGA ATTCCGCCCC
GGCGGTGCCG TCACCACAGG CCTTTTGCGC GACACCGCCA GTGCGGCCAT CGGCGCCTGG
CGGGACAACG GCTATGCCAC CGCAGAGGTC AGCGATCAGC AGATTACCGC GCGCAATGGG
GATGCCGTCC TTGATGTGCG CGTGCGCGTT GAGCCGGGGC AGATTGTCCA GTTCGGCACC
CTCGTGCCCC GTGGGCAGGA GCGGATGCGC GTCGAACGCA TTCTGGCAAT CGCGGGTCTT
CCGCAGGGTG AGACGTTCTC GCCGGACACG CTGGACCGGG TCGAAGGACG CTTGCAAGAC
ACCGGCGTCT TTTCTGCCAT TGCCTTGCAA GAGGGCGACG TCGGCCCCGA CGGCGTGATG
AATATCGAGG CCACGCTGGT GGAAAGTGAG CCGCGCCGTT TTGGCTTCGG GGCGGAGGTA
TCAACGGATG ACGGCGCCTC TCTCAGCGCC TATTGGCTGC ACCGCAACCT GTTCGGTGGG
GCAGAGCGGC TTCGGATCGA GGGGGAGATC AGCGGCATCG GCTCAGAAGG GCTGAATGTG
GAAGATGTGG AAGGGATCGA CGCCTCCGTC GGGCTGCGCT ACTCGCGCCC CGCCACGTTC
ACGCCCGACA CCACCGCTTA TCTGGAACTT GGCCTGAACT ATTTTGACGA TCCGGCATTC
ACGTTCACCA ATGTTGGCGC GGAAGTGGGT GTCGAGCATC GTTTTGACCG CCGCCTGACC
GGAACACTCG GCCTTGCAGT CGACTATTAT GACATCCAGA CGCCTTTCGG GAATGATCAG
ATTATCGTTC TGTCTACGCC ACTTGGGATG ACATGGGATC GCAGGGACGA TCCGCTCGAT
GCCCGGGAGC TGTTCTATCT GAACGGCACC GCAACACCGT TCATCACCGA TCAGGGCGGC
GCTGGTTCGC GCGTATATGT GGACGGCCGC GTCTATCTTG GTTTTGGCGA AACCCGTGCC
AGCCGCATCG CCGTGCGGGG GCAATTGGGC AGCGTCTTCG GGGGCGAGCT ATCTGATATT
CCACCGGATT TCCTGTTTTT CTCGGGCGGC GTTGGAACCG TGCGGGGGCA GGAGTATCAA
TCGCTCGGCG CGATCCAGAA CGGCATCGAC GACGGCGGCC GCAGCTTTGC CGGTCTATCG
ACCGAGTTTC GCCAGGACAT CGGAGAGACC AACTTCGGCC TCGTGGCCTT TGCCGATGCC
GGGTTCATTG GCACCGATGC GACGGGCGGC GAAGGTGATT GGCATGCGGG CGCGGGTCTT
GGCGTGCGAT ACGACACGCC CTTTGGCCCC ATCCGCGTCG ATCTCGCTAC GCCCGTGCGC
GGTGAGGGGG TCGGCGAGGA CGTCTATATC TATATCGGCA TCGGGCACGC GTTTTGA
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| Protein sequence | MGGRQIIASA LVACALAGAG QAQDIQLSAP GVDEDLTDRL RASSLLLQET EEVRTAQDLI
AAARADYGRL VAALYDAGHF SPVVRIDVDG REAARIPPFG GPRSVNQITI RVEPGPVFQL
GTAEIAPLAP DTELPGEFRP GGAVTTGLLR DTASAAIGAW RDNGYATAEV SDQQITARNG
DAVLDVRVRV EPGQIVQFGT LVPRGQERMR VERILAIAGL PQGETFSPDT LDRVEGRLQD
TGVFSAIALQ EGDVGPDGVM NIEATLVESE PRRFGFGAEV STDDGASLSA YWLHRNLFGG
AERLRIEGEI SGIGSEGLNV EDVEGIDASV GLRYSRPATF TPDTTAYLEL GLNYFDDPAF
TFTNVGAEVG VEHRFDRRLT GTLGLAVDYY DIQTPFGNDQ IIVLSTPLGM TWDRRDDPLD
ARELFYLNGT ATPFITDQGG AGSRVYVDGR VYLGFGETRA SRIAVRGQLG SVFGGELSDI
PPDFLFFSGG VGTVRGQEYQ SLGAIQNGID DGGRSFAGLS TEFRQDIGET NFGLVAFADA
GFIGTDATGG EGDWHAGAGL GVRYDTPFGP IRVDLATPVR GEGVGEDVYI YIGIGHAF
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