Gene Jann_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0218 
Symbol 
ID3932655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp212950 
End bp213843 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content57% 
IMG OID637902560 
ProductUDP-glucose pyrophosphorylase 
Protein accessionYP_508160 
Protein GI89052709 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA AAGTTACCAA GGCGATCTTT CCGGTCGCGG GTCTTGGCAC CCGTTTCCTA 
CCAGCGACCA AATCGATCCC GAAAGAGATC ATGACCTTGG TCGACCGCCC CCTGATCCAA
TACGCGATTG ACGAAGCCCG CGCTGCTGGC ATCAAGGAGT TCATCTTTGT GACCAGTCGC
GGCAAGTCCG CGCTGGAAGA CTACTTCGAT CATACGCCAG AGCTTGAGAA CACCCTGCGC
AAGAAGGGCA AGACCGACAT GTTGGAGATG CTGAAAAGCA CCAACATGGA TTCGGGCGCG
ATTGCGTATA TGCGTCAACA CAAGGCTCTG GGTCTGGGTC ACGCGGTCTG GTGTGCCCGG
CGATTGCTGG GAAATGAGCC ATTTGCCGTG ATCCTGCCTG ATGACGTGAT CGCAGCCGAC
ACGCCCTGCC TGCAACAGAT GGTTGAGGCG CACGCTGAAC TTGGCGGCAA TATGGTCGCG
GCCATGGAAG TGCCGGACGA CAAGACATCC TCCTACGGGA TTTTGGATGT GAAAGAGGAT
ATGGGGTCCG TTGTGTCCGT GAAGGGCATG GTTGAGAAAC CGCCTCAGGA CAAAGCGCCC
TCCAACCTGG CCGTGATCGG GCGCTATATT CTTTCGCCGG ACGTTATGGG GCACCTCAAC
AAAATCAAAT CCGGCGCAGG GGGTGAGATT CAATTGACCG ACGCCATCGC GCAGGAAATC
GTCAGTGCGG ACAACGTCTA TGGCTATCGG TTCAAGGGTC AGAGGTTCGA TTGCGGGTCC
AAGGCGGGCT TTTTGCAGGC AACGGTGGCG TTTGGTCTGG CGCGTGATGA TCTTCGGGAT
GAGTTTCAGG ATTACCTCGC CGACATGATG TCTGCCCGAA GCGCGGCCCA GTAA
 
Protein sequence
MKKKVTKAIF PVAGLGTRFL PATKSIPKEI MTLVDRPLIQ YAIDEARAAG IKEFIFVTSR 
GKSALEDYFD HTPELENTLR KKGKTDMLEM LKSTNMDSGA IAYMRQHKAL GLGHAVWCAR
RLLGNEPFAV ILPDDVIAAD TPCLQQMVEA HAELGGNMVA AMEVPDDKTS SYGILDVKED
MGSVVSVKGM VEKPPQDKAP SNLAVIGRYI LSPDVMGHLN KIKSGAGGEI QLTDAIAQEI
VSADNVYGYR FKGQRFDCGS KAGFLQATVA FGLARDDLRD EFQDYLADMM SARSAAQ