Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0171 |
Symbol | |
ID | 3932608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 164358 |
End bp | 165602 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902513 |
Product | photosynthetic reaction center cytochrome c subunit |
Protein accession | YP_508113 |
Protein GI | 89052662 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCCCA AGTGGTTTGA TAAGTGGAAT GACGACAATC CCACTAACAT CTTTGGCCCC GCGATAGCTG TTGGTGCCCT GGGCGGCGCG GTCTTTGTCG CGGCTTTGAT CGTGGGCTTT GGCCAACCCT ATGCCACCGC GTCGATGCAG ACGGGCCCCC GCGGCACCGG CATGCATGTC GCGGAGTTTG AGGCGAGCCT GGCTGCCGGC GATCCCACGG TCATCGATTT CTACACCGAT GAGCCTTTCG TTCCGGAAGA GGGGGAAGAG CTGGCGGGCG ATATCTACGA GAACGTCCAG GTTCTGGGCG ATCTCACCGA TGCCAACTTC AACCGTCTGA TGGGTGCGAT CACCCAATGG GTCGCCCCGG AAGAGGGGTG TACCTACTGT CACGCCAATG CGGCGGATGG GGAGTATGCG GATGATGACC TTTATACCAA GGTCGTGGCC CGCTCGATGT TGACGATGAC GCGCAACATC AACGTGAACT GGGATGCCCA TGTGAACGCC AACTACGAAG TCGGCGTCAC GTGCTACACC TGTCACCGCG GTCAGCCCGT ACCAAACAAC GTCTGGTTCC GCATCAGCCC GGTGAACGAG AATGCGGAAG GCTGGAGCGC GAACCAGAAC CGCGCGACCA TGGCGTCCAA CTTCACGTCT CTGCCGTCGG ACTATCTGGA ACATTACCTG CTAGAGTCCG ACGACGGTGG CTACAACATG ATCGCGGTCC ATGACCTCGA CAGCCGCGTG CAGCAGCAGC CCGGTGATCC GCTGATCCAG CAGACCGAAC GGACCTATGC GTTCATGAAC TACATCTCGA ACTCTCTGGG GGTGAATTGC ACGTTCTGCC ACAATTCCCG CGCGTTCTAC GATGGCGCTC AGAACACGCC GCAATGGGGC ACGGCATCGC TCGGCATCAT CATGGTGCAA GAGATGATCG CAGAGCATCT GCTGCCGCTC CAGGATGTGT ACCCGGAAAA CCGGCTCGGG CCGGTCTACG GCGACGCCCC CCTGGCCGCT TGCCGGACGT GTCACCAAGG CTATCAGCAA CCGATGCAGG GCCTGAACGT GATCGCGAAC TGGCCTGAGT TGAACGTCCT AGAAGGCCCG CCGGACTATT CAGCCTGGGA AGTTGCGGAG GCTGATCCGG AGCCGGAGGC CGCCGAGGCC GAAGACATGG ATCCCGAGGC AGACGCGCCC GAGGCCGATG AAGACCCGGA AGCTGAAGAA GAGGTTTCCG AGTGA
|
Protein sequence | MFPKWFDKWN DDNPTNIFGP AIAVGALGGA VFVAALIVGF GQPYATASMQ TGPRGTGMHV AEFEASLAAG DPTVIDFYTD EPFVPEEGEE LAGDIYENVQ VLGDLTDANF NRLMGAITQW VAPEEGCTYC HANAADGEYA DDDLYTKVVA RSMLTMTRNI NVNWDAHVNA NYEVGVTCYT CHRGQPVPNN VWFRISPVNE NAEGWSANQN RATMASNFTS LPSDYLEHYL LESDDGGYNM IAVHDLDSRV QQQPGDPLIQ QTERTYAFMN YISNSLGVNC TFCHNSRAFY DGAQNTPQWG TASLGIIMVQ EMIAEHLLPL QDVYPENRLG PVYGDAPLAA CRTCHQGYQQ PMQGLNVIAN WPELNVLEGP PDYSAWEVAE ADPEPEAAEA EDMDPEADAP EADEDPEAEE EVSE
|
| |