Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0092 |
Symbol | |
ID | 3932528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 86924 |
End bp | 87643 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637902433 |
Product | two component transcriptional regulator |
Protein accession | YP_508034 |
Protein GI | 89052583 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.586554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA GCATGGACAT AGGCGCGCAT CTTCTGATCG TGGATGATGA TGAGCGTATC CGCTCGCTCC TTCAGAAGTT CCTGATGCGC AACGGGTTCA TGGCGTCTGG CGCACGCGAT GCCGGGCAGG CGCGTGTTCT TCTGGCGGGG CTGAGCTTCG ACATGATCGT GCTCGATGTG ATGATGCCGG GTGAAGATGG GCTGAGCCTG TGTCGCGATA TCCGCGCGAC GTCTTCCACC CCGATCCTGT TGCTGACAGC CAATGGCGAG CCCGATGACC GGATCGAGGG GCTGGAGGCC GGGGCGGACG ATTACCTTTC CAAACCGTTC GAGCCCAAGG AATTGCTGCT GCGGATCAAC GCGATCCTGC GCCGCATGCC CGCGCCGACC GAGGACGCGA CCGTGCCCCA GGTCATCCAC CTTGGCCCCG TGCGCTATGA TATCGAGCGC GGTGAAATGT GGCAGGGCCA GGACCCCGTG CGCCTGACCG CGACGGAGGC TGCGTTGATG CGGATCTTCG CGCATCAACC GGCGGAGGCA CTGTCGCGGG GTGAGTTGGT GAGCCTTCTG AACCGCGACA AGGTGGGTGG AGAGCCGGTG CAGGAACGGG CCGTAGACGT GCAGATCACA CGGCTGCGGC GCAAGATCGA GATGAACCCG AAACAGCCCC GCTACCTGCA GACCGTGCGC GGAGCGGGCT ATATGCTGTC GCCTGATTGA
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Protein sequence | MNMSMDIGAH LLIVDDDERI RSLLQKFLMR NGFMASGARD AGQARVLLAG LSFDMIVLDV MMPGEDGLSL CRDIRATSST PILLLTANGE PDDRIEGLEA GADDYLSKPF EPKELLLRIN AILRRMPAPT EDATVPQVIH LGPVRYDIER GEMWQGQDPV RLTATEAALM RIFAHQPAEA LSRGELVSLL NRDKVGGEPV QERAVDVQIT RLRRKIEMNP KQPRYLQTVR GAGYMLSPD
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