Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0053 |
Symbol | |
ID | 3932489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 48209 |
End bp | 48832 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902394 |
Product | HAD family hydrolase |
Protein accession | YP_507995 |
Protein GI | 89052544 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCT CAGCGGTCAT CTTCGACATC GGCAACGTGC TGATCGAGTG GCAACCCGAA CGTCACTACG ACCGCGTGAT CGGTGAGGCA CAGCGGCGAG AGATGTTTGC GGCCGTGGAT CTGCACGGGA TGAATGACCG CGTGGACCGG GGCGAGGATT TTCGGACCAC GGTGCAGGAC TGTGCCGCCG CCCACCCGGA ATTCCATGAC GAGATCATGC TGTGGCATGA CGATTGGATC CACATGGCCA CCCCCGCCAT TCCCCGTTCC GCGGTGCTGT TGCGCAATTT GCGTCATCGC GGCGTGCCCG TCTTTGCGCT GTCCAACTTC GGGATCCAGA CGTTTGAGAT CGCCAAGCCA ACCTATCCGG TCCTGGCCGA GTTCGACCGC GCCTATATCT CGGGTCATAT GGGCGTCACC AAGCCCGATG CGGACATCTA CGCACAGGTA GAGGCGGATT GTGGCCTAGC GCCCGAGAGC CTGCTGTTCA CCGACGATAG GGACGATAAT ATCAAGGCCG CACAGCGGCG TGGGTGGCAG ACCCATCTGT TTGACGGGCC CGAGGGGTTG GCCAAACGGC TGGTGCAAGA CGGGCTGTTG AGCGAGAAGG ATGCGGGGCT ATGA
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Protein sequence | MAVSAVIFDI GNVLIEWQPE RHYDRVIGEA QRREMFAAVD LHGMNDRVDR GEDFRTTVQD CAAAHPEFHD EIMLWHDDWI HMATPAIPRS AVLLRNLRHR GVPVFALSNF GIQTFEIAKP TYPVLAEFDR AYISGHMGVT KPDADIYAQV EADCGLAPES LLFTDDRDDN IKAAQRRGWQ THLFDGPEGL AKRLVQDGLL SEKDAGL
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