Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0033 |
Symbol | |
ID | 3932469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 30186 |
End bp | 31061 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902374 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_507975 |
Protein GI | 89052524 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTCC AAGGCTCGAT GCCCGCTCTG GTCACTCCGA TGACAAATGG TGCTGTGGAC TTTGAGGTGC TGAAACGTCT GGTCGACTGG CATGTGGAGG AAGGCTCCAA CGGGTTGGTG CCTGTGGGGA CGACGGGTGA AAGCCCCACG CTGACCCATG AAGAGCATGA GCAGGTGATT GAGACGGTCG TGAAGGCCGC CGGTGGCCGC GTTCCGGTGA TCGCGGGCGC GGGGTCAAAC AACACGGCAG AGGCGATGCG CCATGTGCAA CATGCCAAGG ATGTGGGGGC TGATGCCACG CTTGTGGTGA CGCCTTATTA CAACAAGCCG ACGCAGCGTG GGTTGATCGC CCATTACGAG GCGTTGGCCG AGGTCGGCAT CCCGATTTTC ATCTACAACA TTCCGGGTCG GTCTGTGGTT GATATGACGC CCGAGACGAT GGGCGAGCTG GCAAAGCACC CAATGATCAT CGGCGTGAAG GACGCGACGG CGGACATGGC GCGGGTATCC AGGCAGCGCG AAACCTGCGG CACGGATTTC GTGCAAATGT CCGCGGAAGA TGCCAGCGCA CTGGGCTTCA ACGCCCATGG CGGTGTGGGG TGTATCAGCG TCACGGCCAA CGTTGCGCCG AAGTTGTGCG CGGAATTTCA GGCGGCCATG GGGGCAGGCG ACTATACCGA AGCACTGGCG TATCAGGATC GCCTGATGCC GCTTCACAAT GCGATCTTCA CGGAGCCGGG CCTCTGCGGC GTGAAATATG CGATGTCGGT GCTGGGCCTA TGCTCGGACG AGGTGCGTTT GCCGTTGGTG GGCGTCGACG AGTCCACCAA GGCCGCGATT GAGGCGGCAC TGCGCCACGC GGGCCTGCTG TCGTGA
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Protein sequence | MMFQGSMPAL VTPMTNGAVD FEVLKRLVDW HVEEGSNGLV PVGTTGESPT LTHEEHEQVI ETVVKAAGGR VPVIAGAGSN NTAEAMRHVQ HAKDVGADAT LVVTPYYNKP TQRGLIAHYE ALAEVGIPIF IYNIPGRSVV DMTPETMGEL AKHPMIIGVK DATADMARVS RQRETCGTDF VQMSAEDASA LGFNAHGGVG CISVTANVAP KLCAEFQAAM GAGDYTEALA YQDRLMPLHN AIFTEPGLCG VKYAMSVLGL CSDEVRLPLV GVDESTKAAI EAALRHAGLL S
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