| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0004 |
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| Symbol | gyrB |
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| ID | 3932440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3950 |
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| End bp | 6367 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902345 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_507946 |
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| Protein GI | 89052495 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TACCCGCGAG CGGTGACGAC TACGGCGCTG ATTCCATCAA AGTTCTCAAA
GGGTTGGAGG CGGTTCGTAA GCGCCCCGGC ATGTATATCG GCGATACCGA TGACGGCTCT
GGTCTGCACC ACATGGTCTA TGAGGTCGTC GACAACGGCA TCGACGAGGC TCTGGCCGGT
CACGCGGACG CCGTGACAGT GACGCTGCAC GCCGACAGCA GCGTTTCGGT GAGCGATAAT
GGACGCGGCA TTCCCGTTGG CATCCACGAA GAAGAAGGTG TCTCCGCCGC TGAAGTCATC
ATGACCCAGC TTCATGCGGG CGGTAAGTTC GACAGCAACT CCTACAAGGT CTCGGGCGGT
CTGCACGGCG TCGGCGTATC CGTGGTGAAC GCCCTGTCCG ACTGGTTGGA GCTGCGGATC
TGGCGTGACG GCAAGGAACA TATCGCGCGG TTTGAGGGCG GCTTTACCAC CAAACCATTG
GAAGTCGTCA GCGAGTGCGG CGACCGCACC GGCACGGAAG TGCGCTTCAT GGCCTCGACT
GAGACATTCT CCAACCTCGA TTACGTGTTC AAAACCCTTG AAAACCGTTT GCGGGAACTT
GCATTCCTGA ACTCGGGCGT GCGGATCATC CTGCGCGATG AACGGCCCGC CGAGGCATTG
GAATCGGACC TGTTTTATGA AGGTGGCGTG CGGGAATTCG TCCGCTATCT GGACCGCTCC
AAGACATCCG CCATGGAAGA GCCGATCTTC ATCACCGGCG AGAAGGACGA TATCGGCGTC
GAAGTCGCCA TGTGGTGGAA CGACAGCTAC CATGAGAACG TCCTGCCGTT TACCAACAAC
ATCCCCCAGC GGGACGGCGG CACCCACCTG GCGGGCTTCC GGGGGGCACT GACGCGGACG
ATCAACCTTT ATGCGCAGTC CTCGGGCATC GCGAAGAAAG AGAAGGTCAG CTTCACCGGC
GATGATGCGC GTGAGGGCCT GACCTGTGTT CTGTCCGTCA AAGTGCCAGA TCCGAAATTC
AGTTCTCAGA CCAAAGACAA GCTCGTCTCG TCCGAGGTGC GCCCCGCCGT CGAAGGCCTG
GTGAACGAGA AGCTGCAAGA GTGGTTTGAA GAGCATCCCC ACGAGGCGCG CGTGATCGTG
TCCAAGATCG TGGAAGCCGC ACTGGCCCGC GAAGCCGCCC GCAAAGCGCG GGAATTGACC
CGGCGCAAGA CGGCGATGGA TATCGCCTCG CTCCCCGGGA AGCTGGCCGA TTGTCAGGAG
AAAGATCCGT CCAAATCCGA GCTGTTCCTG GTGGAGGGTG ACAGCGCCGG TGGCTCTGCC
AAGCAGGGCC GCTCCCGTCA TAACCAGGCG GTCCTGCCCC TGCGCGGTAA AATCCTGAAC
GTGGAACGCG CGCGCTTTGA CCGGATGTTG GGAAGCCAGG AAATCGGGAC GCTGATCACC
GCCCTTGGCA CTGGCATTGG CCGGGACGAG TTCAACATCG ACAAGCTGCG CTACCACAAG
ATCATCATCA TGACCGACGC CGACGTTGAC GGCGCGCATA TCCGGACGCT TTTGCTGACC
TTCTTCTTCC GCCAGATGCC GGAGCTGATT GAAGGCGGCT ACCTCTATAT CGCGCAGCCG
CCGCTTTATA AGGTCAGCCG CGGCAAGTCC GAGGTCTATC TGAAGGACGA AACCGCGCTG
GAAGATTATC TGGTTGCCCA AGGTGTCGAA GGCGCGTCGC TGCGTCTGTC CTCGGGAGAA
GAGATTGCCG GGCAGGATCT GGCCCGCGTC GTCACCGGCG CGCGCAACTT CAAGCGGATC
CTTGATGCGT TTCCCACACA TTACCCCCGC CGCATCGTCG AACAGGCCGC ACTTGCCGGT
GCATTTGACG CGGGCAAAGC CGATGCGGAT CTGCAAGGGG TCGCCGATGA TGTGGCCAAG
CGCCTCGATC TGGTTGCGGT GGAATATGAG CGGGGCTGGA ATGGCCGCAT TACCCAGGAT
CATGGCATCC GCCTGAGCCG CGTTTTGCGC GGTGTGGAAG AGATCCGCAC CCTTGACGGC
GCAGTCCTGC GATCCGGTGA GGCGCGCAAG CTGGCCGAAG TCTCCAAGGA CAGCCGCACC
GTTTACCAGG ACCCTGCGAC GCTGACCCGC AAGGATCGGG TACAGTTGAT CCACGGCCCG
ACAGAGCTTC TGAAGGCGAT CCTGGATGAA GGCGCCAAGG GCCAGCAGAT GCAGCGCTAC
AAGGGTCTGG GTGAAATGAA CCCGGACCAG CTGTGGGAAA CCACGCTGGA TCACGAAGCC
CGCACGCTGT TGCAGGTGAA GATCGACGAT CTGGCCGATG CCGACGACAT CTTCACCAAA
CTGATGGGCG ATGTGGTGGA GCCCCGGCGG GAATTCATCC AGAATAATGC GCTCAGCGTG
GAAAATTTGG ATTTCTAG
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| Protein sequence | MNDIPASGDD YGADSIKVLK GLEAVRKRPG MYIGDTDDGS GLHHMVYEVV DNGIDEALAG
HADAVTVTLH ADSSVSVSDN GRGIPVGIHE EEGVSAAEVI MTQLHAGGKF DSNSYKVSGG
LHGVGVSVVN ALSDWLELRI WRDGKEHIAR FEGGFTTKPL EVVSECGDRT GTEVRFMAST
ETFSNLDYVF KTLENRLREL AFLNSGVRII LRDERPAEAL ESDLFYEGGV REFVRYLDRS
KTSAMEEPIF ITGEKDDIGV EVAMWWNDSY HENVLPFTNN IPQRDGGTHL AGFRGALTRT
INLYAQSSGI AKKEKVSFTG DDAREGLTCV LSVKVPDPKF SSQTKDKLVS SEVRPAVEGL
VNEKLQEWFE EHPHEARVIV SKIVEAALAR EAARKARELT RRKTAMDIAS LPGKLADCQE
KDPSKSELFL VEGDSAGGSA KQGRSRHNQA VLPLRGKILN VERARFDRML GSQEIGTLIT
ALGTGIGRDE FNIDKLRYHK IIIMTDADVD GAHIRTLLLT FFFRQMPELI EGGYLYIAQP
PLYKVSRGKS EVYLKDETAL EDYLVAQGVE GASLRLSSGE EIAGQDLARV VTGARNFKRI
LDAFPTHYPR RIVEQAALAG AFDAGKADAD LQGVADDVAK RLDLVAVEYE RGWNGRITQD
HGIRLSRVLR GVEEIRTLDG AVLRSGEARK LAEVSKDSRT VYQDPATLTR KDRVQLIHGP
TELLKAILDE GAKGQQMQRY KGLGEMNPDQ LWETTLDHEA RTLLQVKIDD LADADDIFTK
LMGDVVEPRR EFIQNNALSV ENLDF
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