Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_2059 |
Symbol | |
ID | 5390065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 1810311 |
End bp | 1811582 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862913 |
Product | major facilitator superfamily protein |
Protein accession | YP_001398964 |
Protein GI | 153952398 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGCA AAACTTATAA ATTTCATCCA AATGATACAA AAATGGATAA AAAAATAATT CAAATTACCG AAAAATCCGG ATTTAAAGCA GCTGTGTTTT CTATGGCCGC TATGACTATG CTAGGAAGTG TAGTCATTTC ATCTGCTCTA CCTGCTATCA ACAGACATTT TGAAGAACTT TTAACCCAAA GTGGTGCTAC TCTTGCTTCA AGTTTCACAT TAGCTCATCT TGATATACTT GTTCGCTTAG TTTTAACCAT CCCTGCTATT TTTGTTGTCA TTTTATCTCC ATTTGCTGGT ATTTTAATGG ATAAATTTGG CAAATTAAAA TTCATTCTTC CGGCTATGGT GGTTTGGACT ATTTCTGGGA TAAGTGGTTT TTTCTTAAAT GATATTTATG CTATACTGAC TTCAAGAGCT ATCTTTGGTA TAGCAACTGC TTTTATAATG ACAGGTGCTT CAGCCTTGCT TGGAGATTAT TATAGTCGTG GTGGCTTTAA TCGCAGAGAA AATGCTTTAA GTCTTCAAGG ATTTTTTTGT GCGGTAGGGG GTGCTGTTTT TATTTCTATT GCAGGATTTG TTTCGAGTTA TTCTTGGCGC TATCCTTTTT TGGTATATGG GCTTGGAATT TTAATTACCT TAATGGCTAT CATTTATCTT TTTGAACCTA GAAAATTTAA ATTCTATAAT CATACAAAAA TAGAAGCAAA AACAAATTAT TGGCAATTTT TTCCTATCTA TTTTATAGGT TTTTTTATCA TGGTGGTTTA TTATATTTCA CCAACTCAAC TCCCTTACTA TATAGAAGAA CATTTAGGAT TGGATCCTAA ATATATAGGT ATTTCGATGT CTGTATCTGC GCTATGTTAT GGTTTTTTCT CTCTAAGCTA TAGACACATT ATAAAATTCT TAAGTATTAA AACTATCTAT GTTTTAACTC TTTTTATCGT ATCTTGTTCT TTTTTGCTGC TTTTTTTGGT AGATAGTTTT TTCACAGTTT TAATCGCCTT AGCCCTACTT GGAATGGGCG GAGGTATTAT GCTTGTAAAT AATACGGCTT ATCTTTTTTC AATCTGTCCT GAAAATGCTC GCGCTAGGGC TTATGGAATT TTAGCAAGTT GTATATTTTT AGGACAATTT TTAAGTCCTA TTATCTCTCA ACCTATCGTT AGGCAAATGG GTCTTGTAGA TGCTTTTTTA ATATGGTCAA TAGTAATTTT TATAGTATGC ATTGTGTTTT TATTTTTAAA GCAAAAACCT AGGATAAATT AA
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Protein sequence | MNGKTYKFHP NDTKMDKKII QITEKSGFKA AVFSMAAMTM LGSVVISSAL PAINRHFEEL LTQSGATLAS SFTLAHLDIL VRLVLTIPAI FVVILSPFAG ILMDKFGKLK FILPAMVVWT ISGISGFFLN DIYAILTSRA IFGIATAFIM TGASALLGDY YSRGGFNRRE NALSLQGFFC AVGGAVFISI AGFVSSYSWR YPFLVYGLGI LITLMAIIYL FEPRKFKFYN HTKIEAKTNY WQFFPIYFIG FFIMVVYYIS PTQLPYYIEE HLGLDPKYIG ISMSVSALCY GFFSLSYRHI IKFLSIKTIY VLTLFIVSCS FLLLFLVDSF FTVLIALALL GMGGGIMLVN NTAYLFSICP ENARARAYGI LASCIFLGQF LSPIISQPIV RQMGLVDAFL IWSIVIFIVC IVFLFLKQKP RIN
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