Gene JJD26997_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_2023 
Symbol 
ID5390420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp1784798 
End bp1785448 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content36% 
IMG OID640862881 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001398937 
Protein GI153951598 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0214049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AACTTATTAA AATAAACAAC TTAAATAAAG AATTTGGCAA AGTTAAAGCC 
TTAAACAATA TCAACTTAAG CGTCTATGAA GGAGAATGGC TTGCCATCAT GGGTCCATCA 
GGAAGTGGAA AATCAACACT TTTAAACATA CTATCACTCA TGGACACTCC AAGCTCTGGA 
GAGTATATCT TAGACAATGA AAACCTAGAG CAAATGGATG AAGAGCAAAA AATCACTTTG 
CGTCGTGAAA AAATAGGACT TGTCTTTCAA CAATTTCATC TCATCCCCTA TCTTAACGCC 
CTAGAAAATG TTATGCTTTC TCAGTATTAT CACTCAAGCG TAGATGAAGA AGATGCCAAA 
ATGGTTCTTG AAAAAGTAGG ACTTTCACAC AGACTCACTC ATTTACCTAG CCAATTAAGT 
GGCGGAGAAC AACAAAGAGT TTGCATAGCA AGAGCTTTGA TCAACAACCC AGAGCTTTTA 
CTCGCAGATG AACCCACAGG AAATTTAGAT GAAGCCAATG AAAAAATCGT TCTTCAAACC 
TTGCAAAAAT TAAAAAATGA AGGCAAAACC ATAGTTTTAA TCACACACAA TCCTGATTTG 
GCTAAATTCG CAGATCGAAC CCTTATCTTA CAACATGGGG TGTTAAAATG A
 
Protein sequence
MKKELIKINN LNKEFGKVKA LNNINLSVYE GEWLAIMGPS GSGKSTLLNI LSLMDTPSSG 
EYILDNENLE QMDEEQKITL RREKIGLVFQ QFHLIPYLNA LENVMLSQYY HSSVDEEDAK 
MVLEKVGLSH RLTHLPSQLS GGEQQRVCIA RALINNPELL LADEPTGNLD EANEKIVLQT 
LQKLKNEGKT IVLITHNPDL AKFADRTLIL QHGVLK