Gene JJD26997_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_2008 
Symbol 
ID5390336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1770832 
End bp1771722 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content31% 
IMG OID640862869 
ProductABC transporter periplasmic substrate-binding protein 
Protein accessionYP_001398925 
Protein GI153951405 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAATA GAGCAAATTA TTTTTTTGTA GGACTTTTTG TTTTTGGAGT ATTTTTTGCA 
AGTCTTGGTT TTATATTTTG GCTTGGGGGA TACTCTAAAG AAGAAAGTTT TAAGTATTAT
GAAATTCACA CACAAGAATC CGTTGCAGGA CTTGGTATAA AAGCACCTGT AAGGCTTTTG
GGTGTGGAAG TAGGTAGCGT AGAAGAAATC AGCATTTACA ATCAAGATGA ACTCGGCGTT
AACATACGCA TCAAAGTCAA AAATAACACC CCTATAAAAG AAGACACCTT TGCTACTTTG
CAACTTCAAG GTATCACAGG ACTTAAATTT GTCCAACTTC AAGGCGGAAG TAAAAATAGC
AAAGATCTAG TATCTATCCA CGGAAAACTT CCAGTCATTC CTTTTAAAGA AAGTTTTCTA
GCGACCATAG ACAGACAAAG TGAACATATT TTTTCTTTGG TTAAAACAGC CGATGATAAA
TCAAAAGAAC TTTTAAGCGA AAAAAATCTT AAAAATCTAG AAATCTTTTT GCAAAATCTA
GCAGAATTAA GTGCAAATTT AAACGCCGAT TCTAAAAATT TAAGCCTTAA TCTTTCAAAC
GCAAGTTTAA AAATAGGAAA AATGGCTGAT AATATAAGCC TTAGTGCGCA AAATTTCAAC
TCCAGTCTTA AAGACATAAA AGAAAGCACA ATGATTTTAA AAAATTTCAT AAAAAAAGCT
GATGAAAAAT TAAACACTTA TGATGATATT AAAGCATCTT TGATGCAAAA TTTAGAGCTT
TTTAAACAAG TTTTAATTGA AAGCAATATT CTAATAGAAA ATTTACAAAA CAGCCCTGCT
GATTTGATTT TTAAAGAAAC CAAACCTAAA CTAGGACCAG GAGAAAAATA A
 
Protein sequence
MENRANYFFV GLFVFGVFFA SLGFIFWLGG YSKEESFKYY EIHTQESVAG LGIKAPVRLL 
GVEVGSVEEI SIYNQDELGV NIRIKVKNNT PIKEDTFATL QLQGITGLKF VQLQGGSKNS
KDLVSIHGKL PVIPFKESFL ATIDRQSEHI FSLVKTADDK SKELLSEKNL KNLEIFLQNL
AELSANLNAD SKNLSLNLSN ASLKIGKMAD NISLSAQNFN SSLKDIKEST MILKNFIKKA
DEKLNTYDDI KASLMQNLEL FKQVLIESNI LIENLQNSPA DLIFKETKPK LGPGEK