| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1984 |
|---|
| Symbol | sdaA |
|---|
| ID | 5389178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1748321 |
|---|
| End bp | 1749685 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640862847 |
|---|
| Product | L-serine ammonia-lyase |
|---|
| Protein accession | YP_001398903 |
|---|
| Protein GI | 153952475 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATT TAAATATTTT CAAAATAGGC GTAGGTCCTT CATCATCGCA TACTTTAGGA
CCTATGCTCG CAGGAAATTT ATTTTGTAAA AAGATCGCTA AAAAATTAGA GAAAATTGAA
AAAATTCAAA TTATTCTTTA TGGTTCTTTG TCTTTAACAG GCAAAGGGCA TTTAAGCGAT
AAAGCGGTTA TTTGGGGTTT GAATGCTTTA GAAGCCAAAA ACTTAAGCGT GACAATACAA
GATGAAGTAA ATAAAAATGC TATTGAAAAT TCTCAAATTG ATTTTTGTGG CGAGAAAAAA
CTTTGTTTTA ATTATGAAAA AGATTTGATA TTTTCCAAAG ATTTTTTACC TTTGCATGAG
AATGGTATGA AAATTAAAGC TTATGATTGC AAAGGTGTGT TGGTTGATGA AGAAACTTAT
TATTCTGTGG GTGGAGGCTT TGTTTTAACA GCTGCACAAT TAGAAAAAAA AGGCAAAAAT
TCCAACCAAA ATACAAAGAA AAAACTAGAT ATAGAGCTTA ATAATGCAAA AGAAGCTTTA
GAGCTTTGCG ATAAAAGAGA TTGGGATTTA GCAGAGCTTT CTTATCGTTA TGAATTACAA
TTTCACACTA AAGAGGAAAT TCGTGCTTAT TGTCTTGAAA TTTGGGAAGT AATGCAAGAA
GTTTATTATA ATGGCACACA TCCAAATGAA GATTATTTGC CTGGAAAACT TCATTTAAAG
CGTAGAGCCA AAGGGCTTAA AGAAAGAGTA GCGATGACAG CTGATCCTAT GGGCATTATA
GATTTTATTT CTTTATATGC TATTGCGATT GCTGAAGAAA ATGCTAGCGG GGCAAAAGTT
GTAACCGCAC CAACAAATGG AGCGTGTGCT GTTATCCCTG CTGTTATGCT TTATCTTAAA
AATCATACTA TAGGTTTTAG TGATGAAAAG GCTATAGAGT TTTTATTAAC AGCAATGCTT
ATAGGTTCTT TTTATAAGAA AAATGCAAGT ATTAGCGGAG CAGAAGCAGG TTGTCAAGCA
GAAATTGGTA GTGCTAGTTC TATGGCGGCT GCGGCTATGG CAACAGTTTT AGGAGCTAAT
GCTCTTAAAG CATGTAATGC TGCTGAAATG GCAATGGAAC ACCATCTAGG TCTAACTTGC
GATCCAGTTG CAGGACTTGT GCAAATTCCT TGTATAGAAA GAAATGCCTT TGGGGCTATT
AAGGCTATAA GTGCTGCTAG AATGGCAATG ACACGTAAAT CTACTCCTAT GATAAGCCTT
GATGAAGTTA TAGAAACCAT GTATGAAACA GGAAAAGATA TGAATTATAA ATACAAAGAA
ACTTCTTTAG GTGGTCTTGC TACAAATTTA AAAACAGTAT GCTAA
|
|---|
| Protein sequence | MSNLNIFKIG VGPSSSHTLG PMLAGNLFCK KIAKKLEKIE KIQIILYGSL SLTGKGHLSD
KAVIWGLNAL EAKNLSVTIQ DEVNKNAIEN SQIDFCGEKK LCFNYEKDLI FSKDFLPLHE
NGMKIKAYDC KGVLVDEETY YSVGGGFVLT AAQLEKKGKN SNQNTKKKLD IELNNAKEAL
ELCDKRDWDL AELSYRYELQ FHTKEEIRAY CLEIWEVMQE VYYNGTHPNE DYLPGKLHLK
RRAKGLKERV AMTADPMGII DFISLYAIAI AEENASGAKV VTAPTNGACA VIPAVMLYLK
NHTIGFSDEK AIEFLLTAML IGSFYKKNAS ISGAEAGCQA EIGSASSMAA AAMATVLGAN
ALKACNAAEM AMEHHLGLTC DPVAGLVQIP CIERNAFGAI KAISAARMAM TRKSTPMISL
DEVIETMYET GKDMNYKYKE TSLGGLATNL KTVC
|
|---|
| |