| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1968 |
|---|
| Symbol | chuA |
|---|
| ID | 5388624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 1737440 |
|---|
| End bp | 1739512 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640862835 |
|---|
| Product | TonB-dependent heme receptor |
|---|
| Protein accession | YP_001398895 |
|---|
| Protein GI | 153952500 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACCCAA ATAAAAAGCT TTATAAGTTA TCTTTATTTG CATTATTACT AATAACTAAT
TTAAATGCAC AAGAATCAAA TGAAGCTATC AATCTACAAA AAGTTGTTGT TAGTGCAACA
GGTTTTGAAC AAGATGCAGA CTCAAATTTA CGCAATGTAA TCAGCATTGA AGGCAAAGAT
CTGCAAAATA AAGGTTATGT TTCCTTAGAA CAAGCCTTAG AAAGAATTTC GGGCATTAGT
TTTGTAAATT TTGGACTTGG ACGCAATATA GACATGCGTG GACAAGGAAA TAAGTCCAAT
ATAGCTGTAA AAGTTATGAT CGATGGGCGT ACTATTAATG TTCTTGATAA TTCCCATGGT
GTAACCCCGC TAGATAGTAT CAATTTAGAT AATGTAGAAC GCATAGAAAT CATACCTGGG
GGTGGGTCTG TGCTTTATGG AAGTGGTACT AGAGGGGGTG TGATTAATAT CATTACAAAA
AAACAAAAAT CAGATGCTTT TGCTATAAAT TTAAAAAGCA GTGCTTATGA TCATGGTAGA
TTAGGTGGGA ATTTAGGTAT CAATGGCGCC AAACAAATAA ATGAAAATTT AGCTTTTAGC
TTTGATATAC AAAGTTTTAA CCTTGATGGA TATCAAGAAG GTTATAATGA AAAAGGCTAT
TTTATCAACA CAAAAACCTA TATTGATATC AATGATAATA GCGATTTAAC TTTGGGTTAT
AATTATTTTA AAAGCAAAAA TACTAGCAGT GGTTATCTAA CAAAAGCACA AGCTCAAAGC
AATCCAACTC AAAAAGGTAA GAGTGATAAT ATCACACAAA TCAATCGCCC TGAAATTTCT
TTGGATTATC ATTACTATTT TGATGATATA TGGCAATTTA ACCTAGAAGC TTTTTGGCAA
AATCAAAAAA TCAATTATCT AAAATCTGTA GGAAATGGCT TTGAAGACAC ACTTACAGGG
ATAAGTTTAA AAAACAAGCT AAATTATGCA AATAATTCTT ATTTTATTTT TGGTTACGAA
TTTGCAAACC ATGATGCAAA AAGAAAGAGT TTGAGGTATT ATAGTGTTCC GAATGTCATA
AATTATCACA GGATGACAAC TTTAATGGAT ATGACTAAGC AAAGCCATTC TATTTTCGCT
CTTGATTCTC ATAATTTTAA TGAATTTTTT ACTTTATCTG GTGGAGTTAG ATATGAATTT
AGCACTTATA ATACCCATAG ATCTTATAGA AATGAAATGA GTATGAACAA AAAACCCCCA
TCAGACACAA CAACCCTTTT TGATACGAAT AAAAACACCA ATAATTTTGC TTTTGAAATC
ACTCCTAACT TTAAATACTC TGACACAGGT AATCTTTATC TTAAATACGA AAGAGGTTTT
GTTTCTCCTA CACCTGCTCA GTTTGTCAAT AAGGATCAAG CAACTCAAAC GTATTATTCT
GTAAATTTAA ATCCTGAGAT CTTTGATACC TTTGAACTAG GAATTGATGA TTTTTGGTGG
GATTTTTACG GCTTTAATCT AACTTTATTT TACACCCTAA GCAAAGATGA AATTTCTTAT
CGTGGAAACC CTCATGCAAG AGGTGGAGGA TTTTGGCAAT ATTATAATAT AGATCAAACT
CGCCGTTTAG GAGTAGAATT AAGCCTGAGT CAAAATTTTT TAGATGATGA TTTAATCTTT
AGAGAAAGTC TAACTTATCT TGATGCTAAA ATTTCTAAAG GTGTTAATGA CGGCATGAGA
ATTCCTTATG TTTCAAAAAT CAAAGTCACA GCTGGGCTTG AATACGCTTG GAATAAAAAT
TTCTCAAATT TTGTTGATTT AACCTATTTT TCTAGAGCAA AAGATGGTGG AACTATAAAT
GAAAATACAG GAAAAATGTC TAAAAATTCT TGGATAAGGG ATTATTTTTT AACAGATATT
GGCATGAAAT ATAATTATAA AAAATTACAA ATTTTAGCAG GAATTCGCAA TCTTTTTGAT
AAAAGATACT ACACCTACCA AGACAGTATA AATGATCAAT ACCTAGCTGG AAATGGTAGA
AACTACTATG TTGAATTTAA ATACGCGTTC TAA
|
|---|
| Protein sequence | MHPNKKLYKL SLFALLLITN LNAQESNEAI NLQKVVVSAT GFEQDADSNL RNVISIEGKD
LQNKGYVSLE QALERISGIS FVNFGLGRNI DMRGQGNKSN IAVKVMIDGR TINVLDNSHG
VTPLDSINLD NVERIEIIPG GGSVLYGSGT RGGVINIITK KQKSDAFAIN LKSSAYDHGR
LGGNLGINGA KQINENLAFS FDIQSFNLDG YQEGYNEKGY FINTKTYIDI NDNSDLTLGY
NYFKSKNTSS GYLTKAQAQS NPTQKGKSDN ITQINRPEIS LDYHYYFDDI WQFNLEAFWQ
NQKINYLKSV GNGFEDTLTG ISLKNKLNYA NNSYFIFGYE FANHDAKRKS LRYYSVPNVI
NYHRMTTLMD MTKQSHSIFA LDSHNFNEFF TLSGGVRYEF STYNTHRSYR NEMSMNKKPP
SDTTTLFDTN KNTNNFAFEI TPNFKYSDTG NLYLKYERGF VSPTPAQFVN KDQATQTYYS
VNLNPEIFDT FELGIDDFWW DFYGFNLTLF YTLSKDEISY RGNPHARGGG FWQYYNIDQT
RRLGVELSLS QNFLDDDLIF RESLTYLDAK ISKGVNDGMR IPYVSKIKVT AGLEYAWNKN
FSNFVDLTYF SRAKDGGTIN ENTGKMSKNS WIRDYFLTDI GMKYNYKKLQ ILAGIRNLFD
KRYYTYQDSI NDQYLAGNGR NYYVEFKYAF
|
|---|
| |