Gene JJD26997_1873 details

Gene Information

• Locus tag: JJD26997_1873
• Symbol: cas2
• ID: 5390443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: -
• Start bp: 1654808
• End bp: 1655239
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 640862759
• Product: CRISPR-associated Cas2 family protein
• Protein accession: YP_001398819
• Protein GI: 153952447
• COG category: [S] Function unknown
• COG ID: [COG3512] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01573] CRISPR-associated endoribonuclease Cas2

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAG ATAAATTTAT GCGTGTGCTT TTGATGTTTG ATGTGCCAAC TAAAAGTAAA 
AAAGAGCAAA AACTAGCAAG TAAATTTAGA AATAATCTTA TAAAATTAGG TTATTTTATG 
CTGCAATTTA GTGTTTATAT GCGTATTTGC AAGGGTTTAA GTTCTGCAAA AAGTTCTATT 
GAAAATGTAA AAAAGATTTT GCCACCTTAT GGAAATGTAA GGGCTTTAAT CATCACTGAA 
AAGCAATTTG ATAAAATGGA GCTTTTGCTT GGTGGCATAG TTTTTAACGA AAAAGTTAAT 
AACGAAACTA ATTTAACGCT TTTTGATATA GATAGTCATG GAGAATTTAA ATATAAAAAT 
TCAAATAATG AAGAAATTCA AATAAACAAA AAACAAGAAA AATATCATCA GCAAAATTTA 
TTTGAATTTT AA 

 

Protein sequence

MIEDKFMRVL LMFDVPTKSK KEQKLASKFR NNLIKLGYFM LQFSVYMRIC KGLSSAKSSI 
ENVKKILPPY GNVRALIITE KQFDKMELLL GGIVFNEKVN NETNLTLFDI DSHGEFKYKN 
SNNEEIQINK KQEKYHQQNL FEF