| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1591 |
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| Symbol | cmeB |
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| ID | 5389007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | + |
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| Start bp | 1406495 |
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| End bp | 1409617 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640862529 |
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| Product | RND efflux system, inner membrane transporter CmeB |
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| Protein accession | YP_001398590 |
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| Protein GI | 153950964 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AATTTTTTAT CGAAAGACCT GTTTTTGCCT CAGTTGTTGC AATTATCATT
TCTTTAGCTG GAGTCATAGG TCTTACAAAT TTACCTATAG AACAATACCC TTCTTTAACC
CCTCCTACAG TTAAGGTAAG TGCAACTTAC ACAGGAGCTG ATGCACAAAC CATTGCTTCA
ACAGTTGCAA GTCCTATCGA AGATGCAATC AATGGTGCAG ATAATATGAT TTATATGGAT
TCGACTTCAA GTTCTTCAGG AACTATGAGT TTGACCGTTT ATTTTGATAT TGGCACAGAT
CCTGATCAAG CCACCATAGA TGTTAATAAT AGAATTTCAG CTGCAACTGC AAAAATGCCA
GATGCAGTTA AAAAACTTGG AGTAACTGTT AGAAAAACTT CTTCGGCAAC CCTAGCTGCA
ATTTCTATGT ATTCAAGTGA TGGCTCAATG AGTGCAGTGG ATGTATACAA TTACATCGCC
TTAAATGTTT TAGATGAGTT AAAAAGGGTT CCAGGAGTTG GAGATGCAAA CGCTATAGGA
AATCGTAATT ATTCTTTAAG AATTTGGCTA AAACCTGATT TGTTAAATAA ATTTAAAATC
ACAGCTACTG ATGTAATTTC TGCGGTTAAC GATCAAAATG CCCAATACGC AACTGGTAAA
ATTGGCGAAG AACCTGTAAC TCAAAAATCT CCTTATGTTT ATTCAATCAC CATGCAAGGA
AGATTGCAAA ATCCTAGCGA ATTTGAAAAC ATTATTTTAA GAACAAATGA TGATGGATCA
TTTTTAAGAC TTAAAGATAT AGCTGATGTG GAAATAGGAT CACAACAATA CAGCTCACAA
GGACGATTAA ATGGTAATGA TGCGGTTCCG ATTATAATCA ATCTTCAATC AGGAGCAAAT
GCATTACATA CAGCAGAACT TGTCCAGGCT AAAATGCAAG AACTTTCAAA AAATTTCCCA
AAAGGTTTAA CATATAAAAT TCCTTACGAC ACAACAAAAT TTGTGATAGA ATCAATCAAA
GAAGTAATTA AAACTTTTAT TGAAGCTCTA ATTTTAGTTA TCATTGTTAT GTATATGTTC
TTAAAAAATT TCCGCGCAAC ACTTATTCCT ATGATAGCTG TACCTGTTTC ATTGTTAGGA
ACTTTTGCTG GACTTTATGT TTTAGGCTTT AGTATTAACC TACTTACGCT TTTTGCCTTA
ATTTTAGCCA TAGGGATTGT TGTAGATGAT GCGATTATAG TTGTGGAAAA TATCGACAGG
ATTTTACACG AGAATGAACA AATAAGCGTA AAAGATGCTG CTATCCAAGC GATGCAAGAA
GTTAGCTCTC CAGTCATTTC AATTGTTCTT GTGCTTTGTG CTGTTTTTAT ACCGGTTTCT
TTTATATCAG GCTTTGTTGG AGAAATTCAA AGACAATTTG CTCTTACCTT AGCTATATCT
GTAACCATAT CAGGTTTTGT TGCTCTTACC TTAACACCTT CTTTATGCGC ACTCTTTTTG
CGACGTAATG AAGGAGAGCC ATTTAAATTT GTAAGGAAAT TCAATGATTT TTTTGATTGG
AGCACTTCTG TATTTAGCGC AGGAGTAGCA TATATTTTAA AAAGAACCAT TCGTTTTGTT
TTAATTTTTT GTATCATGCT TGGGACAATT TTTTATCTTA ATAAAGCTGT GCCAAATTCT
TTAGTTCCTG AAGAAGATCA AGGTTTGATG ATTGGCATTA TTAACCTTCC TTCAGCTTCA
GCACTCCATA GAACAATCTC AGAAGTTGAT CACATAAGTC AAGAAGTTTT AAAAACTAAT
GGAATTAAAG ATGCAATGGC TATGATAGGA TTTGATCTTT TTACAAGTTC ACTCAAAGAA
AACGCTGCTG CAATGTTTAT AGGCTTGCAA GATTGGAAAG ATAGAAATGT GAGTGCTGAT
AAAATCGCCA TGGAGCTTAA TAAAAAATTT GCCTTTGATC GCAATGCTTC AAGTATATTT
ATAGGCTTAC CTCCTATACC TGGATTAAGT ATCACAGGTG GTTTTGAAAT GTATGTTCAA
AACAAAAGTG GAAAAAGCTA TGATCAAATT CAAAAAGATG TAAATAAACT TGTTGCTGCA
GCCAACCAAA GAAAAGAACT ATCAAGAGTA AGAACAACCC TTGATACAAC TTTCCCTCAA
TACAAGCTTA TAATTGATAG AGATAAATTA AAACACTACA ATCTTAACAT GCAAGATGTT
TTTAACACGA TGAATGCAAC TATAGGCACT TATTATGTTA ATGATTTTTC TATGCTAGGT
AAAAACTTCC AAGTAAATAT CCGCGCAAAA GGTGATTTTA GAAATACACA AGATGCATTA
AAAAATATTT TTGTAAGATC AAATGATGGA AAAATGATAC CACTTGATTC TTTCTTAACT
TTACAAAGAA GTTCAGGGCC TGATGATGTA AAACGATTCA ACCTTTTCCC AGCAGCACAA
GTTCAAGGTC AACCCGCACC AGGTTATACT TCAGGTCAAG CTATAGAAGC GATTGCTCAA
GTAGCAAAAG AAACTTTAGG GGATGATTAT TCCATAGCTT GGAGTGGATC AGCTTATCAA
GAAGTTTCTA GTAAAGGAAC AGCAAGTTAT GCTTTTGCTT TAGGTATGAT ATTTGTATTT
TTAATTCTAG CTGCTCAATA TGAAAGGTGG CTTATACCTT TAGCAGTTGT AACAGCTGTG
CCTTTTGCAG TATTTGGATC ATTTTTATTG GTATATTTAA GAGGGTTTAG TAATGATATA
TATTTTCAAA CAGGACTTTT GCTCTTGATT GGACTTTCAG CTAAAAATGC TATCTTGATC
GTAGAATTTG CAATGGAAGA GCGCTTTAAA AAAGGCAAAG GAGTTTTTGA AGCAGCTGTT
GCAGCAGCAA AACTTCGTTT TCGTCCTATC ATAATGACTT CTTTGGCGTT TACTTTTGGG
GTCTTACCAA TGATTTTTGC AACAGGAGCA GGAAGTGCTT CAAGACACTC TTTAGGAACA
GGGCTTATTG GTGGAATGAT CGCAGCATCA ACTTTAGCGA TATTCTTTGT GCCTTTATTT
TTCTATCTTT TAGAAAATTT TAATGAATGG CTAGATAAAA AAAGAGGTAA GATTCATGAA
TAA
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| Protein sequence | MFSKFFIERP VFASVVAIII SLAGVIGLTN LPIEQYPSLT PPTVKVSATY TGADAQTIAS
TVASPIEDAI NGADNMIYMD STSSSSGTMS LTVYFDIGTD PDQATIDVNN RISAATAKMP
DAVKKLGVTV RKTSSATLAA ISMYSSDGSM SAVDVYNYIA LNVLDELKRV PGVGDANAIG
NRNYSLRIWL KPDLLNKFKI TATDVISAVN DQNAQYATGK IGEEPVTQKS PYVYSITMQG
RLQNPSEFEN IILRTNDDGS FLRLKDIADV EIGSQQYSSQ GRLNGNDAVP IIINLQSGAN
ALHTAELVQA KMQELSKNFP KGLTYKIPYD TTKFVIESIK EVIKTFIEAL ILVIIVMYMF
LKNFRATLIP MIAVPVSLLG TFAGLYVLGF SINLLTLFAL ILAIGIVVDD AIIVVENIDR
ILHENEQISV KDAAIQAMQE VSSPVISIVL VLCAVFIPVS FISGFVGEIQ RQFALTLAIS
VTISGFVALT LTPSLCALFL RRNEGEPFKF VRKFNDFFDW STSVFSAGVA YILKRTIRFV
LIFCIMLGTI FYLNKAVPNS LVPEEDQGLM IGIINLPSAS ALHRTISEVD HISQEVLKTN
GIKDAMAMIG FDLFTSSLKE NAAAMFIGLQ DWKDRNVSAD KIAMELNKKF AFDRNASSIF
IGLPPIPGLS ITGGFEMYVQ NKSGKSYDQI QKDVNKLVAA ANQRKELSRV RTTLDTTFPQ
YKLIIDRDKL KHYNLNMQDV FNTMNATIGT YYVNDFSMLG KNFQVNIRAK GDFRNTQDAL
KNIFVRSNDG KMIPLDSFLT LQRSSGPDDV KRFNLFPAAQ VQGQPAPGYT SGQAIEAIAQ
VAKETLGDDY SIAWSGSAYQ EVSSKGTASY AFALGMIFVF LILAAQYERW LIPLAVVTAV
PFAVFGSFLL VYLRGFSNDI YFQTGLLLLI GLSAKNAILI VEFAMEERFK KGKGVFEAAV
AAAKLRFRPI IMTSLAFTFG VLPMIFATGA GSASRHSLGT GLIGGMIAAS TLAIFFVPLF
FYLLENFNEW LDKKRGKIHE
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