Gene JJD26997_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1336 
SymbolhslV 
ID5389966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1180243 
End bp1180785 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content36% 
IMG OID640862307 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001398381 
Protein GI153952111 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCACG CAACAACGAT TTTAGCTTAC AAAGGTAAAA ATAAATCCGT AATCGGTGGA 
GATGGACAAG TAAGCTTTGG AAACACGGTA TTAAAAGGCA ATGCTATAAA GATTAGAAAA
CTCAACAATG GCAAAGTTTT AGCAGGTTTT GCAGGATCAA CAGCTGATGC TTTTAATCTT
TTTGATATGT TTGAAAATCT CCTTCAAAGT TCTAAAGGCG ATCTTTTAAA AGCAGCGATT
GACTTTTCTA AAGAATGGAG AAAAGACAAA TACCTAAGAA AACTTGAAGC CATGATGCTT
GTACTTGATA GAAATCACAT TTTTCTACTT TCTGGTACAG GCGATGTGGT TGAACCTGAA
GATGGACAAA TCGCAGCTAT AGGAAGTGGT GGAAACTATG CACTTTCAGC TGCTAGAGCC
TTAGCAAAAC ACGCTAATTT AGATGAAGAA GAGCTTGTAA AATCAAGTCT TCAAATCGCA
GGTGAAATTT GTATTTATAC CAATACCAAT ATCAAAACTT ATGTAATCGA GGATGAGAAA
TGA
 
Protein sequence
MFHATTILAY KGKNKSVIGG DGQVSFGNTV LKGNAIKIRK LNNGKVLAGF AGSTADAFNL 
FDMFENLLQS SKGDLLKAAI DFSKEWRKDK YLRKLEAMML VLDRNHIFLL SGTGDVVEPE
DGQIAAIGSG GNYALSAARA LAKHANLDEE ELVKSSLQIA GEICIYTNTN IKTYVIEDEK