Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1050 |
Symbol | |
ID | 5390313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 923415 |
End bp | 924731 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640862055 |
Product | MATE efflux family protein |
Protein accession | YP_001398145 |
Protein GI | 153951906 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0807602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA AACAACTCTC CTTAACAAGA CTTAGTTTTC CTATATTTTG GGACTTGCTT TCTAAGTATT TAACCATGAT TATCAATACC GCTATGGTGT CGCATTATTC TAATTTTCTT GTGGGTGCTA TGGGAGCTGG AAATCAAATT TTAGATCTTT TTATCATTAT TTTTTCATTT TTAAGCGTGG GTTGTAGCGT GGTGATTGCA CAAGCAATTG GTGCAAAAGA TCATGTTTTA GCAAGAAAAG TGATCCATCA AAGCTTGTTC TTAAATGCAC TTTTAGGCTT TGTTTGCGGT GTGTTTATTT TGTGGCATGG GGAGTATTTG CTTTATCTTT TAAAAATCCC ACAAGAACTG CTTAAGGATA GCGAAATTTA CTTAAACATG CTTGCAATTT GTTTGTTTTT TGATGCCATA GGTATTGTTT TAGCTGCTAT TGTAAGGGTT TATAATATGG CTTATTGGGT GATGCTTATA GGCTTTTTGA TGGATATAGT GGTGATTTGT GGAAATTATT ATGTTTTGCA TCATACAAAA TCAGAACTTT TTGGAGTAGG GCTTAGCAAT ATTTTTGCGC GTATTGTTGC TATAGTGGCT TTACTTGTGA TACTTTTTTA TAAACTTAAA ATTCATCTTA AAATCAAAGA AATGATAAAA CTTGAAAAAG AAGTTTTAAA AAAGGTTTTA AATATAGGTG GATTTTCAGC AGGGGAAAAT CTTTTATGGA TAGTCCAATA CACTATAGCC TTTGCTTTTG TAGCAAGCTT AGGTGAGGCG AGTTTGAGTG TGCAAACGAT TTATTTTCAA ATTTCAATGC TTATCATGCT TATAGGACAA GCTACGAGCA TAGCTAATGA AATCATAGTG GGTAAATTAG TCGGTGCTAG ATATGAAAAT ATAGCTTATA AACACGCTTG GCGTGCTTTG TATTTTAGCG TGGTAGCGAG TGCTTTAGTG GCACTTTTGA ATTATCTTTG TCAAGATTTT ACTATGCAAA TTTTAGGGCT TGAAGAAGAG TTAAAAAATT TAATGATACC TTTATTTGCC CTTTCAATCT TTCTTGAAAT TTCACGCACT TTTAACATAG TCATGGTCAA TTCTTTGCGT GCAAGTGGGG ATGCTAAGTT TCCATTTTTT AGCGGACTTG TTTTTATGAT GGGAGTATCT TTACCTGTGG GTTATGTGCT TTGTTTTCAT TTTAATCTTG GAATTTTAGG GGTTTGGATA GGATTTTGTG CGGATGAGTT TTTGCGTGGA ATGGTAAATT CATACAGATG GAAAAGTAAA AAATGGCAAG GCAAAGCTCT AATTTAA
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Protein sequence | MAKKQLSLTR LSFPIFWDLL SKYLTMIINT AMVSHYSNFL VGAMGAGNQI LDLFIIIFSF LSVGCSVVIA QAIGAKDHVL ARKVIHQSLF LNALLGFVCG VFILWHGEYL LYLLKIPQEL LKDSEIYLNM LAICLFFDAI GIVLAAIVRV YNMAYWVMLI GFLMDIVVIC GNYYVLHHTK SELFGVGLSN IFARIVAIVA LLVILFYKLK IHLKIKEMIK LEKEVLKKVL NIGGFSAGEN LLWIVQYTIA FAFVASLGEA SLSVQTIYFQ ISMLIMLIGQ ATSIANEIIV GKLVGARYEN IAYKHAWRAL YFSVVASALV ALLNYLCQDF TMQILGLEEE LKNLMIPLFA LSIFLEISRT FNIVMVNSLR ASGDAKFPFF SGLVFMMGVS LPVGYVLCFH FNLGILGVWI GFCADEFLRG MVNSYRWKSK KWQGKALI
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