| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0897 |
|---|
| Symbol | cstA |
|---|
| ID | 5388980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 796055 |
|---|
| End bp | 798166 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640861921 |
|---|
| Product | carbon starvation protein A |
|---|
| Protein accession | YP_001398013 |
|---|
| Protein GI | 153951850 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000953526 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGT TAAGTACTAA AATTTTATGG TTGTTTGTTG CAACTTTAGG CGCTATTTGT
TTTGGTTATT TAGCTTTACA AAATGGTGAA AGTGTATCAG CGATTTATTT GGTGGTCGCT
GCTGTATGTA TTTATATGAT AGGATATAGA TTTTATGGGC GTTTTGTAGC TTATAAAGTT
TTAGAACTTG ATAAAAATCG TGCAACACCA GCACTTGTAG AAAATGATGG GCGTGATTTT
GTGCCTACAA ATAAAGCTGT ATTATTTGGA CATCATTTTG CTGCTATTGC AGGAGCGGGT
CCATTAGTAG GACCTATCTT GGCTGCTCAA ATGGGATATT TACCTTCTAT GCTTTGGATT
TTAATAGGAG GAGTTTTAGC AGGTGCTGTG CATGATTTTG TTGTTCTTTT TATATCTACT
CGTAGAAAAG GTAGAAGTCT TGGCGAGATG ATTAAGGATG AGATGGGTAA ATTTGCAGGT
GGAATTGCTA TGGTGGCGAT TTTTGGCATT ATGCTTATTA TTATTGCCAT TTTAGCTATG
GTGGTTGTAA AAGCTTTAGC AGAATCTCCA TGGGGTTTAT TTACTATCGC AATGACTATT
CCTATAGCAA TATTTATGGG AATTTATATG CGTTTTATTC GCCCAGGTAG AGTAGGGGAG
GCCTCTATAA TAGGTTTTGT GCTTTTAATT TTAGCTATTC ATTATGGTAG CGTTATAGCT
GCTGATCCTT ATTGGGCTAA AATATTTACT TTAGAAGCTC CAACTTTGGC AATTGTTATG
ATGGCTTATG GTTTCATTGC TTCTGTTTTA CCTGTGTGGT TTTTACTTGC TCCAAGAGAT
TATCTTTCAA CTTTTTTGAA AATTGGTGTT ATTGTGGTAA TGGCTGTAGC TATTGTTTTG
GTTGCTCCTG ATTTGCAAAT GCCAAAAGCA AATACTCAGT ATTTTGATGG AACAGGTCCA
GTATTTGCAG GTGGAATATT TCCATTTTTA TTTATTACCA TTGCTTGTGG TGCGATCAGT
GGTTTTCATG CTTTGATTTC TAGTGGAACT ACTCCTAAAA TGCTTGAAAA CGAAACTCAT
GCTTTAACTG TTGGATATGG ATCTATGCTT GCTGAAAGCG CTGTGGCGAT TATGGCTTTA
ATTTGTGCTT GTATTTTACA TCCAGGTCTT TATTTTGCTA TAAATTCAAG CTCTGCTTCG
ATAGGAACAG ATGTTGTAAA TGTAGCACAA ACTATTTCAA ATTGGGGATT TAGTATTACT
CCTGAAGAAA TTACTACTTT AACCACAAAT ATAGGAGAGC ATACTATACT TTCAAGAACA
GGTGGAGCTC CAACTTTTGC TATAGGTGTA GCTTTGATCT TGCATGAACT TTTTGGTGGC
GTGGATTTAA TGGCTTTTTG GTATCATTTT GCTATATTGT TTGAAGCTTT ATTTATTTTA
ACAGCGGTGG ATGCTGGAAC AAGGGCTTGT CGTTTTATGG TACAAGATAT ATTGGGTAAT
GTTTATAAAC CTTTAGGAAA TACACATAAC TATCCAGCTG GACTTTTAGC CACTGCTTTA
AGTGTTGCGG GTTGGGGATA TTTTCTTTAT CAAGGTGCCA TTGATCCTAA GGGAGGAATT
TATACACTTT GGCCTCTTTT TGGAGTGAGC AATCAAATGC TTGCGGGTAT GGCTTTACTT
CTTGCTACAA CTATACTTGT AAAAATGGGC AAGGCAAGAT ATACTTGGGT TACTTTAATA
CCTGCGGTAT TTGTCTTAGT GGCAACTCTA TATGGAGGAA TTCAAAAAAT TATGCCTTAT
GAAGAAGGCA ATAAAGTAGC AAATGCGGTA AGTCATGTAG CCACCGTTAG CATACAAAGT
CAAAAAATTA AAGATTTAGA ATTTAAATTA AATAATACTA AAGATGAAAA AGAAATTTCT
GCAATTAAAA AAGAAATTTC AATAGCCACT CAAAGTAAAG TTGGAAATTT AATTAATGCA
ATTCTTTGTG TGTTCTTTAT GATAGCTACC TTGCTTGTTA TAATTTCTTG TATAGGAGTT
TGCTTAGGTA AAATTAAAAT TCCTCTTAAA GAAACTAAGT ATATTAAGAT TGATGAATTT
CAAAAAATTT AA
|
|---|
| Protein sequence | MTQLSTKILW LFVATLGAIC FGYLALQNGE SVSAIYLVVA AVCIYMIGYR FYGRFVAYKV
LELDKNRATP ALVENDGRDF VPTNKAVLFG HHFAAIAGAG PLVGPILAAQ MGYLPSMLWI
LIGGVLAGAV HDFVVLFIST RRKGRSLGEM IKDEMGKFAG GIAMVAIFGI MLIIIAILAM
VVVKALAESP WGLFTIAMTI PIAIFMGIYM RFIRPGRVGE ASIIGFVLLI LAIHYGSVIA
ADPYWAKIFT LEAPTLAIVM MAYGFIASVL PVWFLLAPRD YLSTFLKIGV IVVMAVAIVL
VAPDLQMPKA NTQYFDGTGP VFAGGIFPFL FITIACGAIS GFHALISSGT TPKMLENETH
ALTVGYGSML AESAVAIMAL ICACILHPGL YFAINSSSAS IGTDVVNVAQ TISNWGFSIT
PEEITTLTTN IGEHTILSRT GGAPTFAIGV ALILHELFGG VDLMAFWYHF AILFEALFIL
TAVDAGTRAC RFMVQDILGN VYKPLGNTHN YPAGLLATAL SVAGWGYFLY QGAIDPKGGI
YTLWPLFGVS NQMLAGMALL LATTILVKMG KARYTWVTLI PAVFVLVATL YGGIQKIMPY
EEGNKVANAV SHVATVSIQS QKIKDLEFKL NNTKDEKEIS AIKKEISIAT QSKVGNLINA
ILCVFFMIAT LLVIISCIGV CLGKIKIPLK ETKYIKIDEF QKI
|
|---|
| |