| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0837 |
|---|
| Symbol | |
|---|
| ID | 5388780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 754549 |
|---|
| End bp | 755916 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640861869 |
|---|
| Product | DNA transfer in the process of conjugation and F pilus assembly protein |
|---|
| Protein accession | YP_001397962 |
|---|
| Protein GI | 153951180 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00362529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTTA AAAAATCCGA AGAAGAAAAA ACATTTATCG GCATAGGCTT TGATTTAGAG
GATAAAAAAC AAGAGAAGCT TTTAGAAATA TATCAAATGG ATGATAATTC TAAAAATCAC
ACTTTTGTAT TTGGCTCCAC AGGTGTAGGT AAAACAAGAC TCATTGAAGG ACTTATTGAA
CAAGATATTC CAAAAGGGAA AAATGTTGTT ATCATTGATC CTAAAGGCGA TATAGGGCTG
TTTTCAAAAA TGGTTGAAAT TGCTAAAAAA AGTAATAGAG AAAAAGAGCT TATGTTTTTA
AGTCCTATTT ATCCTGAATA TTCTATCAAA ATTAATCCGT TAGCAAATTA CTACATGGAA
GAAGAAATCA TTGCTCATAT TGTTTCAGGT GTTCCTGCAA AAGATGAGTT CTTTTATAAT
GTTGCAAATG AAACAACCAC AGCTGTTGTA AAAGCTTTGC TTATTATTAG GCGTTATGAA
AAGCTAGAAA AACCTTTAAA TTTTGAAGAA ATTGCTGAAA AAGTTTATTA CGAAGGTTTA
AAAGAGCTTC AATCAGAATT AAAAGAAATA CAAAGTAATG GTTTTGAAGA TGATGAGATT
GCTAGATTGC TTGCTCTATA CGATAGGGTT TTATCATCGC CACAAGATTA TTTTGCCAAG
GTTTCATCAA CTCTTAGAAC CACGCTTACT CAAATGACCA TGGGTAATGT AGGAAAAATT
ATAGGTACCG CACAAGAAAA CACTTTTATT AAAAGATTAC AAGAAAATCA AGGTGTGCTT
TTATATATTA TGACAGGTTC TATGCTTACA AGGCAAGTAT CAAGTATTAT TTCTAAAGTA
ACCATCTCCA TGATTCAATC TTGTGTGGGC AGGGTTTATG CCTCAGGAAA AAAATTTGAT
AAAACATTAA AAATTTACAT TGATGAGGCT GCTTCTTCTG TGTATAGGGG TATAGAAACT
TTATATGCTC AAGCAAGGGG TGCAGGAGTA GCTATTATGG GATTAACTCA ATCAGCAGCT
GACTTAGCAG CTGAAATAGG ACAAGATGGG GCAAACAGAT TATTAGAACT TACCAACACT
AAAATAATTA TGCGTTTAAA TGATACAAAA AGCTCTAAAA TGATTTCAGA TCTAGGGGGT
AAAAAAAGAG CTTATTCTTA TTTTTTAACC GTAGAAGGAG GAATTACTTC AAGAGAGGTT
GAAGAATTAA ATATTGAGGT TGATGATGTG ACCAACCTAC AAAAAAGAGA ATTTTTTTAT
TTTGGTTTTG AAGGGCGTTT TAAAGGAAAG ACTTTAAAAG TGAATGATGG AAAATTAGTT
GTGGATATGC CTAATGTAAC TCAAAAAAAC GAGGATTTTA ATGTTTGA
|
|---|
| Protein sequence | MILKKSEEEK TFIGIGFDLE DKKQEKLLEI YQMDDNSKNH TFVFGSTGVG KTRLIEGLIE
QDIPKGKNVV IIDPKGDIGL FSKMVEIAKK SNREKELMFL SPIYPEYSIK INPLANYYME
EEIIAHIVSG VPAKDEFFYN VANETTTAVV KALLIIRRYE KLEKPLNFEE IAEKVYYEGL
KELQSELKEI QSNGFEDDEI ARLLALYDRV LSSPQDYFAK VSSTLRTTLT QMTMGNVGKI
IGTAQENTFI KRLQENQGVL LYIMTGSMLT RQVSSIISKV TISMIQSCVG RVYASGKKFD
KTLKIYIDEA ASSVYRGIET LYAQARGAGV AIMGLTQSAA DLAAEIGQDG ANRLLELTNT
KIIMRLNDTK SSKMISDLGG KKRAYSYFLT VEGGITSREV EELNIEVDDV TNLQKREFFY
FGFEGRFKGK TLKVNDGKLV VDMPNVTQKN EDFNV
|
|---|
| |