Gene JJD26997_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0749 
Symbol 
ID5390565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp671109 
End bp674126 
Gene Length3018 bp 
Protein Length1005 aa 
Translation table11 
GC content31% 
IMG OID640861791 
ProductAcrB/AcrD/AcrF family protein 
Protein accessionYP_001397885 
Protein GI153950950 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC TAGCTATAAA CCGACCTATT ACCGTGCTAA TGTTTTTCTT AGCTCTTATG 
ATTTTTGGGC TGATTTCTGC TTTTAGTATG AGTGTGAATT TATTTCCTAA TGTTTCCATA
CCTCTTATAA AAATCACAAG CAAGGTAAAT GGAGATTTAA ATTTCGTAGA ATCAAAAGTT
ACTAAAGAAA TAGAAAATGC TCTAAGTGAA ATCGATGGAG TAAAGACCAT AACCTCAGCT
GCATATGATA ATTTTAGCGT GAGTGTAGTC GAGTTTAAAC TGGGTAAAAA TCTTGAAGTA
GCTGCTAATG ATGTGCGTGA TAAAATAGGA ACTTTAAGCC TACCTTCTAA GCCTGAAATT
GAAAAAATCA GTTCAGATTC TGGTTCTGCT ATTTCGCTTT TTTTATATTC TAAAGATAAA
TTACAACTCA TGCGTGAAAT CAATGATAAA ATAAAGCCTT TTTTGCAAAG AGTTGAAGGA
GTAGGTAAAA TCGAAGCTAA AGGGTTTTTA GAACCCCAAA TTCGCATAGA ATTAAAACCA
AACGAACTTA GAAAATACAA TCTTAATGCC CTTGATGTAG CAAATATTAT CAAAAGTCAA
AATTTTAAAC AAGCCCTAGG CGAACTTAAT AACAAACAAG ACAATTATAT CATCAAAGGC
TATTTTGAAG CCACAAATTT AGAAGAACTT AGCAATCTTC GCATAAAAAC AGGGGTATTT
TTAAGCGATA TTGCTAATAT TTCAAGCCTT TATGAAGATG AAAAACAAAG TGCTTTATAC
GAAGGCAAAG AAGGAGTGCT TTTAGAACTC GGAAAAATCA CAAATTATAA TACCCTTGAA
ATGATTAAAA ATATCAAAAA TGCCTTGCCT ATTTTAGAAA AACAAATTCC AAAAGATATA
AGTATCAATG TGCTTTATGA TAAAAGCTTA AATATCCACA AGCACCTTTC TCAAGTGATT
TTTGATATGG TTTTGGGAAT TTTTCTAACC CTTGTTATCG TGTTTTTATT TTTAAGAAAT
TTAAGTGCAA CCCTCATTGC TTGCATAGCT ATACCTACTT CTATCATTTC AACTTTTTTT
ATTATCGATC TTTTAGGCTA TGATTTAAAC CGCTTAACTT TCATAGCTCT AACCTTAAGC
ATAGGAATTT TTATCGATGA TGCTATAGTA GTCATTGAAA ATATTGCTAA AAAACTAAAA
ACTTATCCGC CTTTACAAGC TGCTTTTTTG GGTATCAATG AAATAGGTTT TAGCGTTTTA
AGCATAAGTA TAGTTTTACT TTGTGTTTTT ATCCCTATTT CTTATATGAA CTCTATACCA
GGGCTTTTTT TCAACGCCTT AGGCATCAGT GTTGCAAGTG GGATAGTTAT AAGCTTTTTG
GTTTCTGTAT TTTTAATACC TAGTGTTGGA GCAAGATTTT TAAATTCAAA AGAAAGCAAG
TTTTATGAAA AAACAGAAGC TTTTTTTGAA AAAATAGAGC AAAAGTATGA AAATTTACTC
TATAAAATTT TACAAAATAA AGCAAAATTT ATCCTAGCCA CTCTTGTTTT TGTAGGACTT
TCTTTTGCTT TAGCTACCCG TATAGGGCTT GATTTTTTAC CTATGGAAGA TGATAGTGAA
ATTCAAGTTT TACTTGAAAG CAAAAAAAAT TTAAGTTTAG AAGCCATGAA AGAAAAAAGT
TTAAATTTGC TTGAAAAAAT CAAAAACGAT AGCAATGTCA AATACGCTTT TTTACTTGTA
GGTTATGATG ATGCCAAAGA TGCTACAAAA GCTAAAATTT ATGTTAAACT TAAAAATTTA
GACGAAAGAA ATTTAAGACA AAGCGCTATA GTAAGTTTAT ATCGTCAAAA ATTTCAAGAT
GAGAGTTTAA AAATCAAAAT TTTAGAACTT CCAAAGATAG AAGGTGCAGG CATTGATGAT
CCGGTGCAAT TTTTAATCTT AGGAGATGAT TTAAACACTC TAAAAGAAGC AGCTTCTCGG
GCAAAAGAAA TTTTAGATAC TAATGCACGC ATTGTAGATA TAAGCGATAA TGCTAATACT
ACAAAAGATG AAGTAGCCTT ACACATCAAC AAAGAAAAAG CTAAACTTTT AGATGTCAAT
CCTGAATATA TCGCTGGAGT TTTAGGGTAT TCTTTTTCGC AACTTAGCGT AGGAAGTATG
GATAGAGGCA ATTCAAAAGA TGATATTATC CTAAGTTTTG CTCCAGAATT TAAAAAAGAC
ATAGAAGCTT TAAAACGCAT TAGCATTAAA AACAACCAAG ATGTAAATTT AGAACTTTCA
AGCGTAGTGG ATTTTATATA CAGTAAGGAT TTAAAAACTA TCAATCGTTA CAATAAAAAC
CGCTCTGTAA AAATCACAGC TGGAGTAAAT GATCTTTCCT TAGGAGCGGT GCAAAAACTT
TTACTGGATA ATATGGATAA AATTTTAAAT AACAATCCAA GTCTTAGCTA TGCTTTTTCA
GGCTTTATCA ATCTTTTAGG TGAAACCGTG CAAGGTTTTG CTATGGCAGT AGCACTTGCT
TTTGTTTTAA TTTATCTTGT TTTAGCCGCA CTTTATGAAA GTTTTATTTT ACCTTTAATC
ATCATGATAA CCATGCCTTT AGCCTTTGGT GGAGCTTCTA TAGGACTTTT TATCACAGGG
CATAATTTTT CGCTTTTTGT ACTTATTGCC ATCATCTTAC TTTTTGGTAT GGTAGGGAAA
AATGCTATTT TGCTTGTGGA TGTAGCTAAT AAAAAATGCC ATGAAGGTTT AGATTCTGAT
AAAGCTCTTT TAATCGCTGG AAAATCTCGC TTAAGGGCTA TATTGATGAC AACTTTTGCT
ATGATTTTTG CTATGCTCCC GCTTGCTCTT TCAAGGGGTG CGGGCTATGA AGCCAATTCT
CCTATGGCAA TAGCCATTAT CTTTGGGCTT ATAAGTTCGA CTTTACTTAC CTTACTCGTA
GTTCCTGCAC TTTTTAAATT TTGTTTTAAA CTAGATAGTA AATTAAGAAA AATTTATGAA
AGAGAAAAAT TAAATTAA
 
Protein sequence
MFKLAINRPI TVLMFFLALM IFGLISAFSM SVNLFPNVSI PLIKITSKVN GDLNFVESKV 
TKEIENALSE IDGVKTITSA AYDNFSVSVV EFKLGKNLEV AANDVRDKIG TLSLPSKPEI
EKISSDSGSA ISLFLYSKDK LQLMREINDK IKPFLQRVEG VGKIEAKGFL EPQIRIELKP
NELRKYNLNA LDVANIIKSQ NFKQALGELN NKQDNYIIKG YFEATNLEEL SNLRIKTGVF
LSDIANISSL YEDEKQSALY EGKEGVLLEL GKITNYNTLE MIKNIKNALP ILEKQIPKDI
SINVLYDKSL NIHKHLSQVI FDMVLGIFLT LVIVFLFLRN LSATLIACIA IPTSIISTFF
IIDLLGYDLN RLTFIALTLS IGIFIDDAIV VIENIAKKLK TYPPLQAAFL GINEIGFSVL
SISIVLLCVF IPISYMNSIP GLFFNALGIS VASGIVISFL VSVFLIPSVG ARFLNSKESK
FYEKTEAFFE KIEQKYENLL YKILQNKAKF ILATLVFVGL SFALATRIGL DFLPMEDDSE
IQVLLESKKN LSLEAMKEKS LNLLEKIKND SNVKYAFLLV GYDDAKDATK AKIYVKLKNL
DERNLRQSAI VSLYRQKFQD ESLKIKILEL PKIEGAGIDD PVQFLILGDD LNTLKEAASR
AKEILDTNAR IVDISDNANT TKDEVALHIN KEKAKLLDVN PEYIAGVLGY SFSQLSVGSM
DRGNSKDDII LSFAPEFKKD IEALKRISIK NNQDVNLELS SVVDFIYSKD LKTINRYNKN
RSVKITAGVN DLSLGAVQKL LLDNMDKILN NNPSLSYAFS GFINLLGETV QGFAMAVALA
FVLIYLVLAA LYESFILPLI IMITMPLAFG GASIGLFITG HNFSLFVLIA IILLFGMVGK
NAILLVDVAN KKCHEGLDSD KALLIAGKSR LRAILMTTFA MIFAMLPLAL SRGAGYEANS
PMAIAIIFGL ISSTLLTLLV VPALFKFCFK LDSKLRKIYE REKLN