Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0749 |
Symbol | |
ID | 5390565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 671109 |
End bp | 674126 |
Gene Length | 3018 bp |
Protein Length | 1005 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640861791 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | YP_001397885 |
Protein GI | 153950950 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC TAGCTATAAA CCGACCTATT ACCGTGCTAA TGTTTTTCTT AGCTCTTATG ATTTTTGGGC TGATTTCTGC TTTTAGTATG AGTGTGAATT TATTTCCTAA TGTTTCCATA CCTCTTATAA AAATCACAAG CAAGGTAAAT GGAGATTTAA ATTTCGTAGA ATCAAAAGTT ACTAAAGAAA TAGAAAATGC TCTAAGTGAA ATCGATGGAG TAAAGACCAT AACCTCAGCT GCATATGATA ATTTTAGCGT GAGTGTAGTC GAGTTTAAAC TGGGTAAAAA TCTTGAAGTA GCTGCTAATG ATGTGCGTGA TAAAATAGGA ACTTTAAGCC TACCTTCTAA GCCTGAAATT GAAAAAATCA GTTCAGATTC TGGTTCTGCT ATTTCGCTTT TTTTATATTC TAAAGATAAA TTACAACTCA TGCGTGAAAT CAATGATAAA ATAAAGCCTT TTTTGCAAAG AGTTGAAGGA GTAGGTAAAA TCGAAGCTAA AGGGTTTTTA GAACCCCAAA TTCGCATAGA ATTAAAACCA AACGAACTTA GAAAATACAA TCTTAATGCC CTTGATGTAG CAAATATTAT CAAAAGTCAA AATTTTAAAC AAGCCCTAGG CGAACTTAAT AACAAACAAG ACAATTATAT CATCAAAGGC TATTTTGAAG CCACAAATTT AGAAGAACTT AGCAATCTTC GCATAAAAAC AGGGGTATTT TTAAGCGATA TTGCTAATAT TTCAAGCCTT TATGAAGATG AAAAACAAAG TGCTTTATAC GAAGGCAAAG AAGGAGTGCT TTTAGAACTC GGAAAAATCA CAAATTATAA TACCCTTGAA ATGATTAAAA ATATCAAAAA TGCCTTGCCT ATTTTAGAAA AACAAATTCC AAAAGATATA AGTATCAATG TGCTTTATGA TAAAAGCTTA AATATCCACA AGCACCTTTC TCAAGTGATT TTTGATATGG TTTTGGGAAT TTTTCTAACC CTTGTTATCG TGTTTTTATT TTTAAGAAAT TTAAGTGCAA CCCTCATTGC TTGCATAGCT ATACCTACTT CTATCATTTC AACTTTTTTT ATTATCGATC TTTTAGGCTA TGATTTAAAC CGCTTAACTT TCATAGCTCT AACCTTAAGC ATAGGAATTT TTATCGATGA TGCTATAGTA GTCATTGAAA ATATTGCTAA AAAACTAAAA ACTTATCCGC CTTTACAAGC TGCTTTTTTG GGTATCAATG AAATAGGTTT TAGCGTTTTA AGCATAAGTA TAGTTTTACT TTGTGTTTTT ATCCCTATTT CTTATATGAA CTCTATACCA GGGCTTTTTT TCAACGCCTT AGGCATCAGT GTTGCAAGTG GGATAGTTAT AAGCTTTTTG GTTTCTGTAT TTTTAATACC TAGTGTTGGA GCAAGATTTT TAAATTCAAA AGAAAGCAAG TTTTATGAAA AAACAGAAGC TTTTTTTGAA AAAATAGAGC AAAAGTATGA AAATTTACTC TATAAAATTT TACAAAATAA AGCAAAATTT ATCCTAGCCA CTCTTGTTTT TGTAGGACTT TCTTTTGCTT TAGCTACCCG TATAGGGCTT GATTTTTTAC CTATGGAAGA TGATAGTGAA ATTCAAGTTT TACTTGAAAG CAAAAAAAAT TTAAGTTTAG AAGCCATGAA AGAAAAAAGT TTAAATTTGC TTGAAAAAAT CAAAAACGAT AGCAATGTCA AATACGCTTT TTTACTTGTA GGTTATGATG ATGCCAAAGA TGCTACAAAA GCTAAAATTT ATGTTAAACT TAAAAATTTA GACGAAAGAA ATTTAAGACA AAGCGCTATA GTAAGTTTAT ATCGTCAAAA ATTTCAAGAT GAGAGTTTAA AAATCAAAAT TTTAGAACTT CCAAAGATAG AAGGTGCAGG CATTGATGAT CCGGTGCAAT TTTTAATCTT AGGAGATGAT TTAAACACTC TAAAAGAAGC AGCTTCTCGG GCAAAAGAAA TTTTAGATAC TAATGCACGC ATTGTAGATA TAAGCGATAA TGCTAATACT ACAAAAGATG AAGTAGCCTT ACACATCAAC AAAGAAAAAG CTAAACTTTT AGATGTCAAT CCTGAATATA TCGCTGGAGT TTTAGGGTAT TCTTTTTCGC AACTTAGCGT AGGAAGTATG GATAGAGGCA ATTCAAAAGA TGATATTATC CTAAGTTTTG CTCCAGAATT TAAAAAAGAC ATAGAAGCTT TAAAACGCAT TAGCATTAAA AACAACCAAG ATGTAAATTT AGAACTTTCA AGCGTAGTGG ATTTTATATA CAGTAAGGAT TTAAAAACTA TCAATCGTTA CAATAAAAAC CGCTCTGTAA AAATCACAGC TGGAGTAAAT GATCTTTCCT TAGGAGCGGT GCAAAAACTT TTACTGGATA ATATGGATAA AATTTTAAAT AACAATCCAA GTCTTAGCTA TGCTTTTTCA GGCTTTATCA ATCTTTTAGG TGAAACCGTG CAAGGTTTTG CTATGGCAGT AGCACTTGCT TTTGTTTTAA TTTATCTTGT TTTAGCCGCA CTTTATGAAA GTTTTATTTT ACCTTTAATC ATCATGATAA CCATGCCTTT AGCCTTTGGT GGAGCTTCTA TAGGACTTTT TATCACAGGG CATAATTTTT CGCTTTTTGT ACTTATTGCC ATCATCTTAC TTTTTGGTAT GGTAGGGAAA AATGCTATTT TGCTTGTGGA TGTAGCTAAT AAAAAATGCC ATGAAGGTTT AGATTCTGAT AAAGCTCTTT TAATCGCTGG AAAATCTCGC TTAAGGGCTA TATTGATGAC AACTTTTGCT ATGATTTTTG CTATGCTCCC GCTTGCTCTT TCAAGGGGTG CGGGCTATGA AGCCAATTCT CCTATGGCAA TAGCCATTAT CTTTGGGCTT ATAAGTTCGA CTTTACTTAC CTTACTCGTA GTTCCTGCAC TTTTTAAATT TTGTTTTAAA CTAGATAGTA AATTAAGAAA AATTTATGAA AGAGAAAAAT TAAATTAA
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Protein sequence | MFKLAINRPI TVLMFFLALM IFGLISAFSM SVNLFPNVSI PLIKITSKVN GDLNFVESKV TKEIENALSE IDGVKTITSA AYDNFSVSVV EFKLGKNLEV AANDVRDKIG TLSLPSKPEI EKISSDSGSA ISLFLYSKDK LQLMREINDK IKPFLQRVEG VGKIEAKGFL EPQIRIELKP NELRKYNLNA LDVANIIKSQ NFKQALGELN NKQDNYIIKG YFEATNLEEL SNLRIKTGVF LSDIANISSL YEDEKQSALY EGKEGVLLEL GKITNYNTLE MIKNIKNALP ILEKQIPKDI SINVLYDKSL NIHKHLSQVI FDMVLGIFLT LVIVFLFLRN LSATLIACIA IPTSIISTFF IIDLLGYDLN RLTFIALTLS IGIFIDDAIV VIENIAKKLK TYPPLQAAFL GINEIGFSVL SISIVLLCVF IPISYMNSIP GLFFNALGIS VASGIVISFL VSVFLIPSVG ARFLNSKESK FYEKTEAFFE KIEQKYENLL YKILQNKAKF ILATLVFVGL SFALATRIGL DFLPMEDDSE IQVLLESKKN LSLEAMKEKS LNLLEKIKND SNVKYAFLLV GYDDAKDATK AKIYVKLKNL DERNLRQSAI VSLYRQKFQD ESLKIKILEL PKIEGAGIDD PVQFLILGDD LNTLKEAASR AKEILDTNAR IVDISDNANT TKDEVALHIN KEKAKLLDVN PEYIAGVLGY SFSQLSVGSM DRGNSKDDII LSFAPEFKKD IEALKRISIK NNQDVNLELS SVVDFIYSKD LKTINRYNKN RSVKITAGVN DLSLGAVQKL LLDNMDKILN NNPSLSYAFS GFINLLGETV QGFAMAVALA FVLIYLVLAA LYESFILPLI IMITMPLAFG GASIGLFITG HNFSLFVLIA IILLFGMVGK NAILLVDVAN KKCHEGLDSD KALLIAGKSR LRAILMTTFA MIFAMLPLAL SRGAGYEANS PMAIAIIFGL ISSTLLTLLV VPALFKFCFK LDSKLRKIYE REKLN
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