| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0620 |
|---|
| Symbol | truB |
|---|
| ID | 5390031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 558743 |
|---|
| End bp | 559561 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640861691 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_001397785 |
|---|
| Protein GI | 153951551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.468931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TCTTTGCAGC CTTTAAACCA AGGGGTTTGA GTTCTAATTC CTTTTTAAGT
ACTTTAAAGA AAAAATATAA AAATAAAAAA GCAGGATATT CTGGTACTCT TGATCCTTTC
GCCAAAGGGG TTTTAATCGT TGCATTTGGA CAATACGCAA AACTTTTCCG TTTTTTAAAA
AAAACTCCAA AAACCTACAA AGCTACTTTA TGGCTTGGAG TTTACTCCTT AAGTCTTGAT
GATCAAAATA TAAAAAAAAT TCAAAATATA AAAGAATTTG ATCTTGCAAT CTTAAAACAA
ATCATTGATC AAATGCAAGG AATTATCTCC TATACACCAC CGCAATTTAG CGCCAAAAGA
ATCAATGGAA CTCGTGCCTA TGAACTTGCA AAAAAAGGTA TAGAAGCAAA TTTAAAACCT
TGTCAAATGG AAGTATTTGA TTGCAAGATC TTAAGCTATA ATCATCCTTT TTTAAATATC
GAAATCACGG TCAGTGAAGG AGCTTATATA AGATCTTATT GTGAGCTTTT TGCTAGAAAA
CTAGGTATTA ATGCGACTTT AAGCTCTTTA GAGCGCATTA AAGAAGGTAA ATTTGTTTAT
AATAATGAGA AAAGCTTAAA TGTGTTAAAA TACATTAATC TAAAGCCAAA TTTTATCAAG
GATTTAAATA AACTAGAAAA TGGTGCTAAA ATTTTTGTCG AAGAATTAGA ATTTCATGAT
GAAGGAGATT ATTATATTGA AACAGAGAAA TATTTTAGCA TAATTAATAT TAAAGAAAAT
ACAGTAAAAT ATCTTCTAAA TAAGGTTGAA AAATGTTAA
|
|---|
| Protein sequence | MNKIFAAFKP RGLSSNSFLS TLKKKYKNKK AGYSGTLDPF AKGVLIVAFG QYAKLFRFLK
KTPKTYKATL WLGVYSLSLD DQNIKKIQNI KEFDLAILKQ IIDQMQGIIS YTPPQFSAKR
INGTRAYELA KKGIEANLKP CQMEVFDCKI LSYNHPFLNI EITVSEGAYI RSYCELFARK
LGINATLSSL ERIKEGKFVY NNEKSLNVLK YINLKPNFIK DLNKLENGAK IFVEELEFHD
EGDYYIETEK YFSIINIKEN TVKYLLNKVE KC
|
|---|
| |