Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0580 |
Symbol | waaF |
ID | 5389562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 523073 |
End bp | 524023 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640861656 |
Product | ADP-heptose--LPS heptosyltransferase II |
Protein accession | YP_001397750 |
Protein GI | 153951984 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.604166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT TTATACACCT TCCCACTTGG CTAGGCGATG CGGTGATGGC TTCACCTGCT TTATACGCCA TAAAAGAACA CTTTAAAGAT GCTCAGTTTA TCCTTTATGG TTCTTTGGTT TCTACGGCAC TTTTTAAGGA ATTTCCTAGT TCTAAAATCA TCATAGAAAA TAAACAATCC CGCTACAAAC AAGCCCTATC TTTACGCAAA AAACTTGGCA AAATCGATCT TAGCTTTGCT TTTAGATCTG CGTTTTCTTC TAAGATTATC TTGCATATTC TTAAAACAAA ACAAAGATAT TTTTTTGACA AAAACAAGCA CAAAGAAGAA CATCAAGTTT TAAAATACCT TTATTTTATA GAAAACTCAC TTCACATAAA AGCTTACCTT AAAGACTTAA AACTTCCCTT TAAGCTAAAA TTTCAAAGCC CTCTTGTCTT AAAAAATGGC AAAAAAATTC TAGGACTCAA TCCTGGCGCA AGCTTTGGAA GTGCAAAAAG ATGGGATGCG AGTTATTTTG CTAAAGTGGC TTTAAATTTC AGCCAAAGTC ATGAAATTTT AATCTTTGGC GCAGGAAAAG CCGAACAAGA ACTCTGCGAT GAAATTTATC AAATTTTAAA AGAACAAAAC ATAAAAGTAA AAAACCTTTG CAACAAAACC ACCATCAAAA CCCTTTGTCA AAATATCGCT TTTTGTGATT TTTTCATCAC AAACGACAGT GGCCCTATGC ACATAAGTGC GGTTTACAAG GTAAAAACCG TGGCTATTTT TGGCCCTACG AAATTTACCC AAACCTCACC TTGGCAAAAT GAAAATGCAA GATGGGTGCA TTTAAATCTA GCTTGTATGC CTTGTATGCA AAAAACCTGC CCTTTAAAAC ACCACAAATG CATGAAAGAT TTAAAGCCTG AAGTGATTTT AAAAGCAATT CAAAATTTAA CTAATATCTA A
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Protein sequence | MKIFIHLPTW LGDAVMASPA LYAIKEHFKD AQFILYGSLV STALFKEFPS SKIIIENKQS RYKQALSLRK KLGKIDLSFA FRSAFSSKII LHILKTKQRY FFDKNKHKEE HQVLKYLYFI ENSLHIKAYL KDLKLPFKLK FQSPLVLKNG KKILGLNPGA SFGSAKRWDA SYFAKVALNF SQSHEILIFG AGKAEQELCD EIYQILKEQN IKVKNLCNKT TIKTLCQNIA FCDFFITNDS GPMHISAVYK VKTVAIFGPT KFTQTSPWQN ENARWVHLNL ACMPCMQKTC PLKHHKCMKD LKPEVILKAI QNLTNI
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