| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0457 |
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| Symbol | mnmC |
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| ID | 5388890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | + |
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| Start bp | 403940 |
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| End bp | 405781 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640861547 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001397642 |
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| Protein GI | 153951661 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000895922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CTAAGCTAAT CTTTAAGGAC AACACTCCTT TTTCTTTGGA TTTTGATGAT
TTTTATTTTA ATTCCAAAGA TGGTTTAAAT GAAAGCAAAT TTGTTTATAC TCATTCTTTT
GAATGGAAAA ATCAAGAAAA TTTCATTATC ACAGAGAGTG GTTTTGGTAT AGGCTTAAAT
TTTTTTCTTA CTTTGAAACG CTTTTTAGAA ACCACTCCTT CTAAGCGTCC TAAAAAACTT
TTTTATATTA GCGTAGAAGC TTTTTATATC GAAAAAGAAC AATTAAGAGA AATTTATCAA
AAACTAAGAT TTTATGAAGA ATTTAAAGAG CTTTTAGAGC ACTTTTTAAA ATTTTATCCT
AAGGCCAAAG AAGGAATTTA TCGTTTTTAT TTTGAAGATT GTTTTTTAGA TCTTGTTTTT
GAAGATATTA CTATTTTAAA AGAATTGGAT TTTAAAGCTG ATGTTTGGTA TTTAGATGGA
TTTTCTCCAA ATAAAAACTC GCAAATGTTT GATGAAAATT TAATCTTTGA AGTGGCAAGA
CTTTCTAAAA AAAATACACA AATTTGTACT TTTTCTTCGG CAAGTTTTTT GCAAAAAAAT
TTAAAAAAAT ATGGCTTTAG AGTAGAAAAA ACCAAAGGTT TTAGAAAAAG AGAAATGATT
AAAGCTTATT TGGAAAATGA GCTTGAGTTT AAAGACAAAG AAGCGTATTT TTCAAGAACA
TTTTCATCTT TAAAAAATAA AAAAGTAGCT ATTATTGGTG CGGGTATATC AAGCGCTGTT
TTAGCTTATG AGCTTAGTTT AAGAGGTTTT AAAATAGATG TTTTTGAAAA ACATTTAGAA
TTAGGCAAGG GTGCAAGCGG AAATGAAAGT GGAATTTTAA GCTCTTTAAT CTTAAAGTCT
AAGGTAAAAT TAGGGGAGTT TTCAGAGCTT TCTTTTATAG AAGCAAGCCG TTTTTATAGG
CAAATTTTAG ATTTAAATTT TAAAGGTGTG GTGGAGTTTG CACATAATGA TTTAATGCAA
GAAAGATTTG ACACACAAAG AGAAAATGTT TTGTTTAAAA TTTCAAAAAA TCAAGCTTTT
TTAGAAGAGG GTGGAGTGAT TTTTCCAAAA AATTTGGTTA AGAATCTTTT TGAAAAAAGC
AAAGCTTGTA TATATTTTAA TCATGAATTT CAAGCTTATA AATTTGAAAA TGAGTGTTTT
ACTTTAAAAT TTAAAAATGA TATTGTTAAA AGTGATTATG CGGTTTTAAT TTATGCTATG
GGCGCAGATA CAAAAGATTT TGTTTTTTAT GATGAGATGA AATTAAGCAA AGTAAGAGGT
CAGGTTACAC ATCTAAAACC TTTTTTAGAT ACCCAGTTTC CTTTATCTTC TAAGGCTTAT
ATTTGCCCTA TAAAAGATGA TTTGCAAGTG ATTGGTGCAA GTTATGATAG GCTTGATGCA
AGTTTAGAAT CAAAAGAAGA AGATGATAAA CAAAATATAG AAAATATAGC CGAATTTATA
GATAAAAATA CAAAATTAGA AATCATAGGC TCTAAGGTGG GTTTTAGGTC TTATTCGAGT
GATCGCTTTA TGATAGTTGG AAATGCTTAT GATGAAGCAT TTTATAAAGA AGAATATAAA
GCTTTATTAT GGACAAAAGA CAAAGAGCAA AAACCAGCTA AAATGTCTTG CAATTTGTAT
TTTAATTTTG CTCATGGATC AAGGGGTTTT AGCACAAGTG TTTTAGCGGC AAGATATTTG
TGTGCATTGA TAAATAATGA ACCCTTGTGT TTAGAAAAAA AATACATTCA CGCTATTCAT
CCTGCAAGAT TTTTGGTTCG CAAACTCAAA AAAGGCTTAT GA
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| Protein sequence | MKKAKLIFKD NTPFSLDFDD FYFNSKDGLN ESKFVYTHSF EWKNQENFII TESGFGIGLN
FFLTLKRFLE TTPSKRPKKL FYISVEAFYI EKEQLREIYQ KLRFYEEFKE LLEHFLKFYP
KAKEGIYRFY FEDCFLDLVF EDITILKELD FKADVWYLDG FSPNKNSQMF DENLIFEVAR
LSKKNTQICT FSSASFLQKN LKKYGFRVEK TKGFRKREMI KAYLENELEF KDKEAYFSRT
FSSLKNKKVA IIGAGISSAV LAYELSLRGF KIDVFEKHLE LGKGASGNES GILSSLILKS
KVKLGEFSEL SFIEASRFYR QILDLNFKGV VEFAHNDLMQ ERFDTQRENV LFKISKNQAF
LEEGGVIFPK NLVKNLFEKS KACIYFNHEF QAYKFENECF TLKFKNDIVK SDYAVLIYAM
GADTKDFVFY DEMKLSKVRG QVTHLKPFLD TQFPLSSKAY ICPIKDDLQV IGASYDRLDA
SLESKEEDDK QNIENIAEFI DKNTKLEIIG SKVGFRSYSS DRFMIVGNAY DEAFYKEEYK
ALLWTKDKEQ KPAKMSCNLY FNFAHGSRGF STSVLAARYL CALINNEPLC LEKKYIHAIH
PARFLVRKLK KGL
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