Gene JJD26997_0053 details

Gene Information

• Locus tag: JJD26997_0053
• Symbol: typA
• ID: 5389568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: -
• Start bp: 62032
• End bp: 63840
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640861210
• Product: GTP-binding protein TypA
• Protein accession: YP_001397311
• Protein GI: 153951246
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAACA TTAAAAATAT AGCAGTTATA GCTCATGTTG ATCATGGTAA AACCACTATG 
GTAGATGAAT TGTTAAAACA ATCAGGCACC TTTAGCGAAA GAGAACAAAT TTCAGAACGC 
GTTATGGATA GCAACGATAT AGAAAAAGAA CGCGGTATTA CCATACTTTC AAAAAACACA 
GCGATCAATT ACAAAGGTAC AAAAATCAAC ATCATAGATA CTCCAGGGCA TGCTGATTTT 
GGAGGAGAAG TAGAACGCGT TTTAAAAATG ATTGATGGAG TTTTGCTTTT GGTAGATGCC 
CAAGAAGGCG TTATGCCACA AACTAAATTT GTGGTTAAAA AAGCTTTATC TTTAGGGCTT 
AAACCTATAG TTGTAATCAA CAAAATCGAC AAACCAGCTG CTGATCCTGA AAGAGTAATC 
AATGAAATTT TTGATCTTTT TGTAGCTTTA GATGCAAACG ATGAGCAACT TGACTTTGCC 
ATAGTTTATG CTGCAGCAAA AAATGGTTAT GCTAAACTTG ATCTAAACGA TGAAAGTGAC 
AATATGGAGC CACTTTTTAA AACTATACTT GAACGCGTTC CAGCACCAAG TGGGACAAAT 
GACAATCCTT TACAACTTCA AGTTTTCACT TTAGGGTATG ATAATTTCGT AGGTAAAATA 
GGCATTGCTA GAATTTTCAA TGGAGTTGTA AAGAAAAACC AAAGCGTAAT GCTTGCAAAA 
GCTGATGGCA CCAAAGTAAA TGGTAGAATT TCAAAACTCA TTGGCTTTAT GGGCTTAGAA 
AAAATGGATA TTGAAGAAGC AGGAAGTGGA GATATCGTAG CTATAGCAGG TTTTGAAGCT 
TTAGATGTTG GCGATAGCAT TGTAGATCCA AACAATCCTA TGCCACTTGA TCCTTTGCAC 
ATTGAAGAGC CAACTTTAAG TATAGTATTT TCTGTAAATG ATGGTCCATT AGCAGGTACT 
GAAGGAAAAC ATGTAACTTC AAATAAAATC GCCGAACGCT TAGAAGCTGA AATGAAAACT 
AACATTGCTA TGAAATACGA AAGCACAGGC GAAGGCAAAT TTAAAGTAAG CGGTAGAGGT 
GAACTTCAAA TCACTATTTT AGCTGAAAAT ATGCGTCGTG AAGGTTTTGA ATTTTGCATG 
GGAAGACCCG AAGTTATCGT AAAGATTGAA GATGGGATTA AAACAGAACC TTTTGAACAT 
TTAGTAATTG ATGTACCTGA GGAATTTAGC GGTGCGGTGA TAGAAAAACT TGGCAAAAGA 
AAAGCTGAAA TGAAAACTAT GACTCCAACT GGAGATGGCC AAACAAGACT TGAGTTTGAA 
ATTCCAGCAC GCGGACTTAT AGGTTTTAGA AGCCAGTTTT TAACCGATAC TAAAGGTGAA 
GGGGTGATGA ATCATAGCTT TTTGGAATTC CGTCCTTTTA GCGGTGCGGT TGAAAAGCGT 
AATAATGGAG CGTTAATTTC TATGGAAAAT GGTGTGGCTT TGGGGTATTC TTTGTTTAAC 
CTTCAAGAGC GTGGAGTGCT TTTCATAGAG CCTCAAACTA AAGTTTATAC TGGCATGATC 
ATAGGTGAGC ACTCTCGTCC AAATGACTTA GATGTTAATC CTATCAAAGG AAAGAATCTT 
ACCAATGTAA GAGCGAGCGG AAGTGATGAT GCGATCAAGC TTGTACCGCC TAGAAAATTA 
AGCCTTGAAA GAGCATTAGA GTGGATAGAA GAAGATGAAC TTGTAGAAGT TACACCTTTA 
AATGTGCGTG TTCGCAAACG CTACCTTGAT CCAACTCAAA GAAAAAGGAT GGAAAAAGCA 
AAATCTTAA 

 

Protein sequence

MKNIKNIAVI AHVDHGKTTM VDELLKQSGT FSEREQISER VMDSNDIEKE RGITILSKNT 
AINYKGTKIN IIDTPGHADF GGEVERVLKM IDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
KPIVVINKID KPAADPERVI NEIFDLFVAL DANDEQLDFA IVYAAAKNGY AKLDLNDESD 
NMEPLFKTIL ERVPAPSGTN DNPLQLQVFT LGYDNFVGKI GIARIFNGVV KKNQSVMLAK 
ADGTKVNGRI SKLIGFMGLE KMDIEEAGSG DIVAIAGFEA LDVGDSIVDP NNPMPLDPLH 
IEEPTLSIVF SVNDGPLAGT EGKHVTSNKI AERLEAEMKT NIAMKYESTG EGKFKVSGRG 
ELQITILAEN MRREGFEFCM GRPEVIVKIE DGIKTEPFEH LVIDVPEEFS GAVIEKLGKR 
KAEMKTMTPT GDGQTRLEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPFSGAVEKR 
NNGALISMEN GVALGYSLFN LQERGVLFIE PQTKVYTGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRKL SLERALEWIE EDELVEVTPL NVRVRKRYLD PTQRKRMEKA 
KS