| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_3020 |
|---|
| Symbol | |
|---|
| ID | 8385329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 3111711 |
|---|
| End bp | 3113162 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644974098 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003131914 |
|---|
| Protein GI | 257054081 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.670561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGC CGTCGTCGAT CGACGTGTTA CTCGTCGACG ACAGTGGATT CTTTCGAACT
GTCGTCTCCG ACAAGCTTGC CGGCTGGGAG GCACTGTCGG TGCGAAAGGC GAGTTCCGGG
CCGGAAGCGC TGGAGATACT CGACCGAGAG GCAATCGATT GCGTGGTGAG TGACTTCGAG
ATGCCGGAGA TGACCGGCCT CGAACTGTAC GAACGTGTCG AAGCGGAGTA CGGCTTGCCG
TTCGTGTTAC TGACCGGCCA GGGCGACGAG GAAACTGCCA GTCGGGCGAT CGGCACCGGC
GTCGACGACT ATCTGCGAAA AGAAGAGATC GCCGAGAGCG GACAGTTGGA CCTGCTCGCG
AACCGGATTC AGAACGTCGT CGCCCAGCGA CAGGCTCGCG AGAAGTACGA ACTGCTGGTG
AACAACACAC CCGACGAGAT ATCACAGGTC ACCCACGACG GGACGATCAT GGCGGCCAAC
GAGGCGGCTG GACGATCGTT CGACACGACC AAAACGGCTC TTGTCGGCCA ACACCTGACT
GATATTTTGC CGAAAGAGAC GGCGGCTGGG CGCTTAAAGG AAGGTCGGAG AGCACTGGCG
ATCAACTCGG CGGTTACGTT CCAGGACAGC GTCGGGTATC GCCACTTCCA CAACGTCGCC
GTACCAGTCA GAGTCGGCAG CGAAGCCGAT TCGTTTCAGC TGATCACACG GGACATCACC
CAACAGAAGC GGCGCGAACA GCAACTCGAA GACCGAACGG AGAAGTTGGC GGTCATCAAT
CGTCTCGTCC GTCACGACAT CAAGAACGAT ATTCAATTGC TCATTGCGTG GGCTGATGGG
GTCAGCGACC ACGTCGACGA TGACGGCCAG GAGTACTTGG CGCGCATCCA GGACACCTGC
GACCACATCT CGGAGTTGAC GAATATCACC CGTGATTTCG TCGAATCGAT CGGGAGCGAC
ACGGACTTGG AATACTCGAG CGTGAATCTC CCCTACATTC TCGAGTCCGA AGTCGAGAAA
GCCGACCGCC GATACGAGAA CCTCCGCGTG ACGATCGAGG GGGAGGTTCC AAATGTCTCC
GTGAGGGGGA ACGAACTTCT GTCGTCGGTG TTCGGGAACC TCTTGAGCAA CGCCGTCCGT
CACCACGATG GGGAAGACCC GCAAGTGACG ATCCGCGTTG AGATGGACGA AACGGACGTG
CGCGTGTCCC TCGCCGACAA CGGCCCCGGT ATCCCCGAGT CGAATCTCGA CAGCATCTTC
GGTAAAGGGG AGATGGGTCC CGAGAGCCCC GGAACCGGAA TCGGTCTGTA TCTGGTCCAC
ACCATCGTCG ATCAGTTTGG CGGCCACGTG AGCGTCGAAA ACACCCCAGA ACAACCCGAG
GGAGCGGACG CGACTGTGGT TGAAGACGCC ACCGGCTGTG TATTCACGGT CGAACTCCAG
AAACACGTCT GA
|
|---|
| Protein sequence | MNEPSSIDVL LVDDSGFFRT VVSDKLAGWE ALSVRKASSG PEALEILDRE AIDCVVSDFE
MPEMTGLELY ERVEAEYGLP FVLLTGQGDE ETASRAIGTG VDDYLRKEEI AESGQLDLLA
NRIQNVVAQR QAREKYELLV NNTPDEISQV THDGTIMAAN EAAGRSFDTT KTALVGQHLT
DILPKETAAG RLKEGRRALA INSAVTFQDS VGYRHFHNVA VPVRVGSEAD SFQLITRDIT
QQKRREQQLE DRTEKLAVIN RLVRHDIKND IQLLIAWADG VSDHVDDDGQ EYLARIQDTC
DHISELTNIT RDFVESIGSD TDLEYSSVNL PYILESEVEK ADRRYENLRV TIEGEVPNVS
VRGNELLSSV FGNLLSNAVR HHDGEDPQVT IRVEMDETDV RVSLADNGPG IPESNLDSIF
GKGEMGPESP GTGIGLYLVH TIVDQFGGHV SVENTPEQPE GADATVVEDA TGCVFTVELQ
KHV
|
|---|
| |