Gene Huta_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_3006 
Symbol 
ID8385315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3096886 
End bp3097998 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID644974084 
Producthypothetical protein 
Protein accessionYP_003131900 
Protein GI257054067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0217613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATC GGGTTCCCGT TGCCGTGGTG TTGCTGGCGA TCGGGTTTGC AGTGGGACCG 
ACTCTGGCAG GTGCAGTCGC CGCGCCAGAG ACGCCAGTGG CTGCGCCGTC CGACGGGCTG
TCGGCGGACC CGGTCGCCAA TGCGACGACC AATGGCAGCG TCTCGCCGAC GAACGGGAGT
ACAACGCCGA CGCTCGGGAG TAAGATGAGT GCGTTCATGC AGTCCAGTAC CGTCTCGGCC
GATGCGTCTG TCGATGACGG GATGTGGAAC GCAGGGGTAG CACGGGCGAA CACGTCGGAG
AAACGAAACG CGGTCGAGCA ACGGACGCAG TCGCTCGAAC GCCGACTCCA GCGACTCGAG
GATCGACTCG CCGCCGCCGA AAACGACAGT GTCGACCTGC GGAACCCGAA CGCCGCAGCG
ACCGTCGCGC GTCTCTCGGC TCGCATCGAG GCACTGGAAC GGTCGATCAA CGAAACCGAC
CGCACAGCTC GTTCGGTGGG TGTTAACACG ACCCGACTCG ACGCCCTCCG ATCACACGCG
TCGAATATGA GTGGCCATCA GGTCGCAGCA ATGGCCCGTA ACCTCTCCGC CGGCCCACCT
CCATGGGCCT CGAACGGGCC ACCGGCTGAC CCACCCGGCC GATCCGGCAA ACCAGATAGT
GTTGGCCCCA GCGGACAGCA CGGCCCCGCA GGCCCGAACG GGGCGGATGG CACGACGACA
CCTGGCCCGA ACGAGACGGA CAGCAAAACC GGACCCGGCT CAATCGGTCC GACCCCAGCC
GGGCCGAAGG ATGGGGCACC TGAAGCAAAC GAAACGAGCC CCGGTTCGAA CGGCAGTGAC
AGCGAGACAC CCGGACAGCA GACGGGCTCC GTGGGGTCGT CGGACGATGC AACCACCGGA
TCAGACAACA GTTCATCCGC GGTGGGAGGG CCTGACGAAA CTGGCCCGGA CCGACGCGGA
CCCACAGCGG GAAACGAGAC ACGAACACCC GGCGGAAGCG ATAATTCAGA CCATCGATCC
GGCGGGTCGT CGGGCGGAAA CGACAACATC GGATCGGCGA CCGGAGACGG CCCCGAGACA
ATCAGCGAAC CGCTGAGACG CCGACTGGTT TGA
 
Protein sequence
MRYRVPVAVV LLAIGFAVGP TLAGAVAAPE TPVAAPSDGL SADPVANATT NGSVSPTNGS 
TTPTLGSKMS AFMQSSTVSA DASVDDGMWN AGVARANTSE KRNAVEQRTQ SLERRLQRLE
DRLAAAENDS VDLRNPNAAA TVARLSARIE ALERSINETD RTARSVGVNT TRLDALRSHA
SNMSGHQVAA MARNLSAGPP PWASNGPPAD PPGRSGKPDS VGPSGQHGPA GPNGADGTTT
PGPNETDSKT GPGSIGPTPA GPKDGAPEAN ETSPGSNGSD SETPGQQTGS VGSSDDATTG
SDNSSSAVGG PDETGPDRRG PTAGNETRTP GGSDNSDHRS GGSSGGNDNI GSATGDGPET
ISEPLRRRLV