Gene Huta_3004 details

Gene Information

• Locus tag: Huta_3004
• ID: 8385313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 3095478
• End bp: 3096059
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644974082
• Product: hypothetical protein
• Protein accession: YP_003131898
• Protein GI: 257054065

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00845956
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGC GCTCCGACCA GCGAACGCGC GAGCGATCGC AGCTCGATAC CGAGGAACTC 
GAAGAGCTCC TCGACACTGG CCCTGACAGT GACGACGTTG GGACGGGATC GACTGAAGAG 
GCAATCTCGG CGGACGCCGA CTCGGGCTTG CTATCGGGAC TCGGCGACCG GCTTGGATCG 
ATGGTCACCC GAACGATCTC GCGTCCGTTC GCCGGCATTC GATCGCGACT GGGTCAGCTC 
TTCTCCGTGC GGACGTTTGG AGTCGCACTC CTCGCCAGTA TCGTCGCGGC GTTCGCGTTC 
GCGTTCGTCA TCCCGTTCGT CGACACGCTC GGAGCGATCG CCGGCATCTT CGCGGTCGGG 
CTTGGATTCG GGCTCGTGGG TGAGCGCCGG CAGTACCTCG AAGTCGGCCT CGCGGGAGCA 
ACCGCTGCTG CACTGGGAGC CGTCATGGAC TTTCTGGTTG TCGCACTGGC CGGCCGTGGT 
GATCTCATCC TCCTGTTCGG TGTCGGCAGC GGCTTGCTCG CTGGCGTGAT CGGACACTAC 
GTCGGTCGGG ATCTCCGTTC CGGGCTGACG CGGGACATCT GA 

 

Protein sequence

MAERSDQRTR ERSQLDTEEL EELLDTGPDS DDVGTGSTEE AISADADSGL LSGLGDRLGS 
MVTRTISRPF AGIRSRLGQL FSVRTFGVAL LASIVAAFAF AFVIPFVDTL GAIAGIFAVG 
LGFGLVGERR QYLEVGLAGA TAAALGAVMD FLVVALAGRG DLILLFGVGS GLLAGVIGHY 
VGRDLRSGLT RDI