Gene Huta_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2854 
Symbol 
ID8385163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2928809 
End bp2929753 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID644973932 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_003131748 
Protein GI257053915 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.247394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGAC GACTTCCGTA CGCGCTCGTC TTCCTTGCGG TCGCCAGCGC GAGTTCCGCT 
CTCGCCGTCG GTCGGATCGG CGTGCCGTGG TTCGACCCGG CCGGGGAAGC CTTGTTCGTC
GAGGCGCTGA CGATCGTCAC GATCCTCTCG GCTGCCTTCG GCGGGTACTG GCTCGTCCTG
GCGTATCTCT CGGGCCACGC TGTGGACAAG CGCCGCCGAC ACGACGCCCG GAACGTGCTT
CGGCTCACCT TCGGGATCGT CGCGACCGTC GCGACGCTGG GCGCGCTGAC CGACCAGTGG
GTCGGCATGC TCGTCTCGCT GGGCGTCGTC GGGTTCGCCG TCACCTTCGC CCTCCAGCAG
CCCCTGTTCT CGCTGATCGG GTGGTTCTAC ATCCTGGTCA ACCGTCCCTA CCAGGTCGGC
GACCGGATCG CCATCGAGGA CACGCGTGGC GATGTCGTCT CGATCGGCTT TTTCGTCACT
GAGGTCTGGG AGATCGACGG CGACCTGGTC TCCACGAACC AGCCGTCGGG CCGGATCATC
ACCGTCCCGA ACAGCGTCGT CCTCTCGAGT CACGTCGTCA ACTTCTACGG CGAGGGCGTC
CCGTACGTCT GGAACGAGCT ATCGGTGCAA GTCGCCTACG AGACAGAGCT GGACTTCGCG
ACCGAGGTGA TGATCGACGT CGCGACCGAA CACCTCGGCG AGGAGATGGC CCAAGAGATC
GGGAAGTATC GCGATCGCCT CGCCGAAACG CCCGTCGAAC TCGACGTGGT CGAGGAGCCG
ACAGTCAACA TCAGCCAGGC GGAGTCCTGG GTGGAATTGC GCCTGCGATA TCTCGTCCAC
CCGCGTCGAG GAACCCGCGC TCGCAACGCC ATGTACGAGA CGATCCTCGA TCGATTCAAC
GAGAATCCCG ACCGCGTGGC GTTTCCGGTC AGCCGGAGCC GGTAA
 
Protein sequence
MTRRLPYALV FLAVASASSA LAVGRIGVPW FDPAGEALFV EALTIVTILS AAFGGYWLVL 
AYLSGHAVDK RRRHDARNVL RLTFGIVATV ATLGALTDQW VGMLVSLGVV GFAVTFALQQ
PLFSLIGWFY ILVNRPYQVG DRIAIEDTRG DVVSIGFFVT EVWEIDGDLV STNQPSGRII
TVPNSVVLSS HVVNFYGEGV PYVWNELSVQ VAYETELDFA TEVMIDVATE HLGEEMAQEI
GKYRDRLAET PVELDVVEEP TVNISQAESW VELRLRYLVH PRRGTRARNA MYETILDRFN
ENPDRVAFPV SRSR