Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2854 |
Symbol | |
ID | 8385163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2928809 |
End bp | 2929753 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644973932 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003131748 |
Protein GI | 257053915 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.247394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCGAC GACTTCCGTA CGCGCTCGTC TTCCTTGCGG TCGCCAGCGC GAGTTCCGCT CTCGCCGTCG GTCGGATCGG CGTGCCGTGG TTCGACCCGG CCGGGGAAGC CTTGTTCGTC GAGGCGCTGA CGATCGTCAC GATCCTCTCG GCTGCCTTCG GCGGGTACTG GCTCGTCCTG GCGTATCTCT CGGGCCACGC TGTGGACAAG CGCCGCCGAC ACGACGCCCG GAACGTGCTT CGGCTCACCT TCGGGATCGT CGCGACCGTC GCGACGCTGG GCGCGCTGAC CGACCAGTGG GTCGGCATGC TCGTCTCGCT GGGCGTCGTC GGGTTCGCCG TCACCTTCGC CCTCCAGCAG CCCCTGTTCT CGCTGATCGG GTGGTTCTAC ATCCTGGTCA ACCGTCCCTA CCAGGTCGGC GACCGGATCG CCATCGAGGA CACGCGTGGC GATGTCGTCT CGATCGGCTT TTTCGTCACT GAGGTCTGGG AGATCGACGG CGACCTGGTC TCCACGAACC AGCCGTCGGG CCGGATCATC ACCGTCCCGA ACAGCGTCGT CCTCTCGAGT CACGTCGTCA ACTTCTACGG CGAGGGCGTC CCGTACGTCT GGAACGAGCT ATCGGTGCAA GTCGCCTACG AGACAGAGCT GGACTTCGCG ACCGAGGTGA TGATCGACGT CGCGACCGAA CACCTCGGCG AGGAGATGGC CCAAGAGATC GGGAAGTATC GCGATCGCCT CGCCGAAACG CCCGTCGAAC TCGACGTGGT CGAGGAGCCG ACAGTCAACA TCAGCCAGGC GGAGTCCTGG GTGGAATTGC GCCTGCGATA TCTCGTCCAC CCGCGTCGAG GAACCCGCGC TCGCAACGCC ATGTACGAGA CGATCCTCGA TCGATTCAAC GAGAATCCCG ACCGCGTGGC GTTTCCGGTC AGCCGGAGCC GGTAA
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Protein sequence | MTRRLPYALV FLAVASASSA LAVGRIGVPW FDPAGEALFV EALTIVTILS AAFGGYWLVL AYLSGHAVDK RRRHDARNVL RLTFGIVATV ATLGALTDQW VGMLVSLGVV GFAVTFALQQ PLFSLIGWFY ILVNRPYQVG DRIAIEDTRG DVVSIGFFVT EVWEIDGDLV STNQPSGRII TVPNSVVLSS HVVNFYGEGV PYVWNELSVQ VAYETELDFA TEVMIDVATE HLGEEMAQEI GKYRDRLAET PVELDVVEEP TVNISQAESW VELRLRYLVH PRRGTRARNA MYETILDRFN ENPDRVAFPV SRSR
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