Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2771 |
Symbol | |
ID | 8385077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2844780 |
End bp | 2845313 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644973846 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003131665 |
Protein GI | 257053832 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.129306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAA TCGAACTCAC GCCGAGTCAG AAAAACATCC TGCAGGAACT CGTCAACCTC TACCGTGACT CCGAAAGTGC GGTAAAGGGC GAGGAAATCG CCGAGCGAGT CAACCGGAAT CCCGGCACGA TCCGCAACCA GATGCAGAGT CTGAAGGCGC TCCAGCTCGT CGAGGGGGTC CCCGGGCCGA AGGGCGGATA CAAACCGACT GCGACCGCCT ACGATGCGTT GCAGATCCAG GACATGGACC ACGCCGCGGA GGTTCCGCTG TTTCACAACG GTGAACAGAT CGAGGAGGCA AACGTCGCCG AGATCAACCT CGCGAGCGTC CATCATCCCG AGAACTGCCG CGCGGAGGTC ACTCTCCAGG GCTCGCTCGC CGATTACGAC GAAGGCGACA GCGTTACAGT CGGCCCGACG CCGCTGTCGA AACTCCAGAT CGTCGGCACG CTCGACGGCA AAGACGACAC CAGCAACAAG CTCATTCTCA CGATCGACGA CATGGTCGCC CCGGCCGAAG CGCCGGAACA CTGA
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Protein sequence | MSSIELTPSQ KNILQELVNL YRDSESAVKG EEIAERVNRN PGTIRNQMQS LKALQLVEGV PGPKGGYKPT ATAYDALQIQ DMDHAAEVPL FHNGEQIEEA NVAEINLASV HHPENCRAEV TLQGSLADYD EGDSVTVGPT PLSKLQIVGT LDGKDDTSNK LILTIDDMVA PAEAPEH
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